Displaying 2 results from an estimated 2 matches for "specst".
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2010 Oct 29
1
Tukey post hoc comparison (glht?) after 3factorial mixed model (lmer)
...anybody could help me. So far I tried:
> K <- cbind(0,diag(length(fixef(model))-1))
> rownames(K) <- names(fixef(model))[-1]
> model_glht <- glht(model,linfct=K)
> summary(model_glht) # but actually this is not what I want
I'm rather looking for a Tukey output like this
specSt:compControl - specSt:compRoot p that they are equal < 0.05
specSt:compControl - specSt:compShoot
specSt:compControl - specSt:compFull
specSt:compRoot - specSt:compShoot
specSt:compRoot - specSt:compFull
specSt:compShoot - specSt:compFull
and that for each of the 3 studied species, i.e....
2010 Oct 31
1
R-help Digest, Vol 92, Issue 31
...anybody could help me. So far I tried:
> K <- cbind(0,diag(length(fixef(model))-1))
> rownames(K) <- names(fixef(model))[-1]
> model_glht <- glht(model,linfct=K)
> summary(model_glht) # but actually this is not what I want
I'm rather looking for a Tukey output like this
specSt:compControl - specSt:compRoot p that they are equal < 0.05
specSt:compControl - specSt:compShoot
specSt:compControl - specSt:compFull
specSt:compRoot - specSt:compShoot
specSt:compRoot - specSt:compFull
specSt:compShoot - specSt:compFull
and that for each of the 3 studied species, i.e....