Displaying 20 results from an estimated 86 matches for "smyth".
Did you mean:
smith
2005 May 20
2
address of Gordon Smyth ?
Anyone know where I can reach the author of the compareGrowthCurves function?
I'm having trouble with it.
Thanks,
Suzie
__________________________________________________________________
Switch to Netscape Internet Service.
New! Netscape Toolbar for Internet Explorer
Search from anywhere on the Web and block those annoying pop-ups.
Download now at
2016 Aug 05
1
Will there be 2016 issues of The R Journal?
...s in
June and December of each year. The June issue has always appeared by this
time (6 August) in previous years.
Has there been a change in the publication schedule? Are there still plans
for a June 2016 issue?
Thanks
Gordon
---------------------------------------------
Professor Gordon K Smyth,
Head, Bioinformatics Division,
Walter and Eliza Hall Institute of Medical Research,
http://www.statsci.org/smyth
______________________________________________________________________
The information in this email is confidential and intended solely for the addressee.
You must not disclose, forwa...
2012 Jul 09
1
Using a function from splines.c in our package
...ine function into our C++ code and declare
where we got it from? Should we include the license declaration from the
header of splines.c? Anything else we need to do satisfying copyright and
be good citizens?
Thanks a lot
Gordon
---------------------------------------------
Professor Gordon K Smyth,
Bioinformatics Division,
Walter and Eliza Hall Institute of Medical Research,
1G Royal Parade, Parkville, Vic 3052, Australia.
Tel: (03) 9345 2326, Fax (03) 9347 0852,
http://www.statsci.org/smyth
______________________________________________________________________
The information in this email...
2005 Jul 27
2
R 2.1.1: read.table processes C-style escapes (PR#8037)
...don
> version
_
platform i386-pc-mingw32
arch i386
os mingw32
system i386, mingw32
status Patched
major 2
minor 1.1
year 2005
month 07
day 22
language R
---------------------------------------------------------------------------------------
Dr Gordon K Smyth, Senior Research Scientist, Bioinformatics,
Walter and Eliza Hall Institute of Medical Research,
1G Royal Parade, Parkville, Vic 3050, Australia
Tel: (03) 9345 2326, Fax (03) 9347 0852,
Email: smyth at wehi.edu.au, www: http://www.statsci.org
2011 Mar 16
1
Standardized Pearson residuals (and score tests)
...age on CRAN to compute score tests from glm fits. The score test for
adding a covariate, or any set of covariates, can be extracted very neatly
from the standard glm output, although you probably already know that.
Regards
Gordon
---------------------------------------------
Professor Gordon K Smyth,
NHMRC Senior Research Fellow,
Bioinformatics Division,
Walter and Eliza Hall Institute of Medical Research,
1G Royal Parade, Parkville, Vic 3052, Australia.
smyth at wehi.edu.au
http://www.wehi.edu.au
http://www.statsci.org/smyth
> Date: Tue, 15 Mar 2011 12:17:46 +0100
> From: peter dalgaar...
2019 Sep 25
2
depending on orphaned packages?
...mespace("SuppDists", quietly = TRUE))
stop("need CRAN package 'SuppDists' for simulation from the
'inverse.gaussian' family")
The statmod package also implements inverse gaussian d/p/q/r functions
<https://journal.r-project.org/archive/2016-1/giner-smyth.pdf>. It is
lightweight (depends on R >= 3.0.0, imports only base packages [stats
and graphics]) and has been around for a long time (archived versions on
CRAN go back to 2003).
Would it make sense to replace the call to SuppDists::rinvGauss with a
corresponding call to statmod::rinvgauss...
2005 Apr 22
1
Infinite degrees of freedom for F-distribution
...6895
Gordon
> version
_
platform i386-pc-mingw32
arch i386
os mingw32
system i386, mingw32
status
major 2
minor 1.0
year 2005
month 04
day 18
language R
---------------------------------------------------------------------------------------
Dr Gordon K Smyth, Senior Research Scientist, Bioinformatics,
Walter and Eliza Hall Institute of Medical Research,
1G Royal Parade, Parkville, Vic 3050, Australia
Tel: (03) 9345 2326, Fax (03) 9347 0852,
Email: smyth@wehi.edu.au, www: http://www.statsci.org
2003 Mar 26
1
formal methods and classes and capitalization conventions
...ost any convention. What I am looking for
are guidelines of good practice for a someone developing a new package
which contains S4 generic functions as well as non-generic functions.
Cheers
Gordon
---------------------------------------------------------------------------------------
Dr Gordon K Smyth, Senior Research Scientist, Bioinformatics,
Walter and Eliza Hall Institute of Medical Research,
1G Royal Parade, Parkville, Vic 3050, Australia
Tel: (03) 9345 2326, Fax (03) 9347 0852,
Email: smyth@wehi.edu.au, www: http://www.statsci.org
2019 Sep 29
2
depending on orphaned packages?
...> stop("need CRAN package 'SuppDists' for simulation from the
> > 'inverse.gaussian' family")
>
>
> > The statmod package also implements inverse gaussian d/p/q/r functions
> > <https://journal.r-project.org/archive/2016-1/giner-smyth.pdf>. It is
> > lightweight (depends on R >= 3.0.0, imports only base packages [stats
> > and graphics]) and has been around for a long time (archived versions on
> > CRAN go back to 2003).
>
> > Would it make sense to replace the call to SuppDists...
2003 Feb 19
3
Rcmd check does not recognize formal generic function as code object
...the method
dispatched.}
\examples{
x <- rnorm(10)
myGenericFun(x)
dim(x) <- c(5,2)
myGenericFun(x)
}
\keyword{models}
-------------------------------- end myGenericFun.Rd -------------------
---------------------------------------------------------------------------------------
Dr Gordon K Smyth, Senior Research Scientist, Bioinformatics,
Walter and Eliza Hall Institute of Medical Research,
1G Royal Parade, Parkville, Vic 3050, Australia
Tel: (03) 9345 2326, Fax (03) 9347 0852,
Email: smyth at wehi.edu.au, www: http://www.statsci.org
2003 Jun 07
2
R CMD check: is it error to setMethod for class not currently defined?
...he R CMD check code.
Gordon
platform i386-pc-mingw32
arch i386
os mingw32
system i386, mingw32
status Patched
major 1
minor 7.0
year 2003
month 05
day 13
language R
---------------------------------------------------------------------------------------
Dr Gordon K Smyth, Senior Research Scientist, Bioinformatics,
Walter and Eliza Hall Institute of Medical Research,
1G Royal Parade, Parkville, Vic 3050, Australia
Tel: (03) 9345 2326, Fax (03) 9347 0852,
Email: smyth@wehi.edu.au, www: http://www.statsci.org
2003 Feb 20
2
Who to decide what a generic function should look like?
I am not sure if what I am asking below should be discussed under r-help
or r-devel, so please feel free to move over to r-devel.
This is a spin off from Gordon Smyth's question about generic functions
and Robert Gentleman's reply. I have tried to raise the question before
and I am sure this has been discussed by others, but never on the r-help
list what I can see. My concern is that generic functions as defined
today are only semi-generic. From ?Methods...
2003 Feb 20
2
Who to decide what a generic function should look like?
I am not sure if what I am asking below should be discussed under r-help
or r-devel, so please feel free to move over to r-devel.
This is a spin off from Gordon Smyth's question about generic functions
and Robert Gentleman's reply. I have tried to raise the question before
and I am sure this has been discussed by others, but never on the r-help
list what I can see. My concern is that generic functions as defined
today are only semi-generic. From ?Methods...
2005 Jan 08
1
p.adjust(<NA>s), was "Re: [BioC] limma and p-values"
>>>>> "GS" == Gordon K Smyth <smyth@wehi.edu.au>
>>>>> on Sat, 8 Jan 2005 01:11:30 +1100 (EST) writes:
<.............>
GS> p.adjust() unfortunately gives incorrect results when
GS> 'p' includes NAs. The results from topTable are
GS> correct. topTable() tak...
2004 Dec 20
2
problems with limma
I try to send this message To Gordon Smyth at smyth at vehi,edu.au but it bounced
back, so here it is to r-help
I am trying to use limma, just downloaded it from CRAN. I use R 2.0.1 on Win XP
see the following:
> library(RODBC)
> chan1 <- odbcConnectExcel("D:/Data/mgc/Chips/Chips4.xls")
> dd <- sqlFetch(chan1,"...
2016 May 20
0
[Bug 752] Lack of Message file and Eventlog Application Source registry entries result in event log errors
https://bugzilla.mindrot.org/show_bug.cgi?id=752
kevin.m.smyth+mindrot at gmail.com changed:
What |Removed |Added
----------------------------------------------------------------------------
CC| |kevin.m.smyth+mindrot at gmail
| |.com
-...
2003 May 24
2
Interpretation of escaped characters in \examples{}
...had expected anything in
\examples{} to be reproduced in the online help and by \example{} entirely
literally with no intepretation.
I am using R 1.7.0pat under Windows 2000 Professional.
Gordon
---------------------------------------------------------------------------------------
Dr Gordon K Smyth, Senior Research Scientist, Bioinformatics,
Walter and Eliza Hall Institute of Medical Research,
1G Royal Parade, Parkville, Vic 3050, Australia
Tel: (03) 9345 2326, Fax (03) 9347 0852,
Email: smyth@wehi.edu.au, www: http://www.statsci.org
2016 Sep 12
3
-fsanitize=memory failing on 3.9.0
If you are on glibc-2.24, did you patch it with the fix
24e2b1cede1952d7d4411a3cafd25dd8593dab9f that revert commits
80f87443eed17838fe453f1f5406ccf5d3698c25 and
a824d609581d5ee7544aabcbbc70e8da44b2b5b6? I had to do that since it
broke go, gcc, and clang address sanitizers without the patch.
On 9/12/16, Renato Golin via llvm-dev <llvm-dev at lists.llvm.org> wrote:
> On 11 September
2011 Oct 04
1
a question about sort and BH
...uot;, "hommel", "bonferroni", "BH", "BY", "fdr", "none")
p.adjust <- function(p, method = p.adjust.methods, n = length(p))
{
## Methods 'Hommel', 'BH', 'BY' and speed improvements contributed by
## Gordon Smyth <smyth@wehi.edu.au>.
method <- match.arg(method)
if(method == "fdr") method <- "BH" # back compatibility
nm <- names(p)
p <- as.numeric(p); names(p) <- nm
p0 <- p
if(all(nna <- !is.na(p))) nna <- TRUE
p <- p[nna]
l...
2005 Jun 13
5
Citation for R
This is just a note that R would get a lot more citations if the recommended citation was an
article in a recognised journal or from a recognised publisher.
I use R in work leading to publications often, and I strongly want to give the R core team credit
for their work. However I find that I can't persuade my biological collaborators to include the
current R citation (below) in their