search for: setrng

Folks, I am finding problems with using "dse": > library(dse1) Loading required package: tframe Error: c("package '%s' required by '%s' could not be found", "setRNG", "dse1") > library(dse2) Loading required package: setRNG Error: package 'setRNG' could not be loaded In addition: Warning message: there is no package called 'setRNG' in: library(pkg, character.only = TRUE, logical = TRUE, lib.loc = lib.loc) This is on R 2.1 on...

...ke to request help with the installation of dse in raqua in mac os x 10.3. I get the following error message after the messages indicating that parts were successfully installed. I would be most grateful for a solution. ----------------------------------------- * Installing *source* package 'setRNG' ... ** R ** inst ** help >>> Building/Updating help pages for package 'setRNG' Formats: text html latex example 00Intro.setRNG text html latex example getRNG text html latex example setRNG...

...runif: 0.7883 iter: 3 chain: 1 runif: 0.40898 iter: 1 chain: 2 runif: 0.28758 iter: 2 chain: 2 runif: 0.7883 iter: 3 chain: 2 runif: 0.40898 iter: 1 chain: 3 runif: 0.28758 iter: 2 chain: 3 runif: 0.7883 iter: 3 chain: 3 runif: 0.40898 I was looking in 'rlecuyer', 'rsprng' and 'setRNG', but did not find anything usable for me. From reading on http://sprng.cs.fsu.edu/ 'rsprng' provides just opposite of what I want, 'rlecuyer' is a bit to technical for me, but I think it also doesn't give identical seed for parallels. 'setRNG', especially it'...

...From: Paul Gilbert [mailto:pgilbert at bank-banque-canada.ca] Sent: sre 2005-06-08 21:01 To: Gorjanc Gregor Subject: Re: [R] Random seed problem in MCMC coupling of chains Gorjanc Gregor wrote: > Thanks to Paul and Gabor for additional tips/examples. Actually, I find > Pauls suggestion with setRNG also nice and is exactly what I wanted. > Paul, if I understand this correctly, your suggestion with setRNG does not > alter "RNG flow", it just takes care that chains really have equal seeds. > I remember that I have read somewhere that destroying "RNG flow over and > o...

In Solaris with R-1.7.0beta from 2003-04-01 I still have a problem with "R CMD check" after I build a package: * creating setRNG-manual.tex ... OK * checking setRNG-manual.tex ... ERROR Could not create DVI version. This typically indicates Rd problems. I can manually gererate the dvi from setRNG-manual.tex, so I don't think my latex is defective as I speculated last week. The file texput.log indicates This is TeX, Ver...

...erated when trying to execute some simple programs. The code was taken directly from the package documentation. Any help on this will be greatly appreciated. Merry Christmas Fernando #################################### # First Example > library("tframe") Loading required package: setRNG > library("dse1") Attaching package: 'dse1' The following object(s) are masked from package:stats : acf simulate > library("dse2") > > fileName <- system.file("otherdata", "eg1.dat", package="dse1") >...

Hi, this is related to a question just raised on Bioconductor where one function sets the random seed internally but never resets it, which results in enforced down streams random samples being deterministic. What is the best way to reset the random seed when you use set.seed() within a function? Is it still to re-assign '.Random.seed' in the global environment as following example

...nable to open connection >In addition: Warning message: >cannot open file `dse/DESCRIPTION' you are left with a temporary directory in $RHOME/library named something like $RHOME/library/file14752 (the number at the end will vary). This directory will contain subdirectories dse1, dse2, setRNG, and tframe. If you move those four subdirectories up a level to $RHOME/library, then dse will work. Duncan Murdoch

...r related with te "index.search" function (line 7 in the example() code). This is the code I am using: example2 <- function (topic, package = NULL, lib.loc = NULL, character.only = FALSE, give.lines = FALSE, local = FALSE, echo = TRUE, verbose = getOption("verbose"), setRNG = FALSE, ask = getOption("example.ask"), prompt.prefix = abbreviate(topic, 6), run.dontrun = FALSE) { if (!character.only) { topic <- substitute(topic) if (!is.character(topic)) topic <- deparse(topic)[1L] } pkgpaths <- find.package(package...

Today I struggled for hours to understand some unexpected package test results. It turned out that this is because package "parallel", buried deep in my dependencies, calls runif() during it's initialization and in this way changes the random number sequence. This seems to be a part of a more general question--which kind of functions can we trust if we want to preserve random

...or code checking rather than statistical results, not using the best available generator is not usually an issue. Most of my own package testing already specifies the generator, lots uses "buggy Kinderman-Ramage" because tests were set up a long time ago. I will have to change package setRNG which warns when the default generator changes. (This warning is intentional because I was bitten badly by a small change in the S generator circa 1990.) > If this goes into base R, what's the best way to do it? What was > the protocol for migrating away from the "buggy Kinderma...

..., or is it dependent the architecture, 2^64 for 64 bit R and 2^32 for 32 bit R? I noticed there are several packages related to RNG- please direct me to a vignette/R news article/previous post if this has been covered ad nauseum. I have skimmed vignettes/docs for rsprng package, RNG doc in base, setRNG package, mvtnorm package vignette (Or am I setting myself up to write a current RNG doc?) (directed to Gregory Warnes) I found a presentation by Gregory Warnes from 1999 addressing these same questions (and uses a "collings generator" in some C code). http://www.r-project.org/conferenc...

...tp://www.uni-bayreuth.de/departments/math/org/mathe7/DISTR/distr.pdf ----------------------------------------------------------------------------------------- Package: distrSim Version: 1.6 Date: 2005-10-17 Title: Simulation classes based on package distr Depends: R(>= 2.2.0), methods, graphics, setRNG, distr Imports: stats Authors: Peter Ruckdeschel <peter.ruckdeschel at uni-bayreuth.de>, Matthias Kohl <matthias.kohl at uni-bayreuth.de>, Thomas Stabla <statho3 at web.de>, Florian Camphausen <fcampi at gmx.de> Description: Simulation (S4-)classes based on package distr Mai...

...tp://www.uni-bayreuth.de/departments/math/org/mathe7/DISTR/distr.pdf ----------------------------------------------------------------------------------------- Package: distrSim Version: 1.6 Date: 2005-10-17 Title: Simulation classes based on package distr Depends: R(>= 2.2.0), methods, graphics, setRNG, distr Imports: stats Authors: Peter Ruckdeschel <peter.ruckdeschel at uni-bayreuth.de>, Matthias Kohl <matthias.kohl at uni-bayreuth.de>, Thomas Stabla <statho3 at web.de>, Florian Camphausen <fcampi at gmx.de> Description: Simulation (S4-)classes based on package distr Mai...

On Wed, 19 Sep 2018 at 13:43, Duncan Murdoch <murdoch.duncan at gmail.com> wrote: > > I think the analyses are correct, but I doubt if a change to the default > is likely to be accepted as it would make it more difficult to reproduce > older results. I'm a bit alarmed by the logic here. Unbiased sampling seems basic for a statistical language. As a consumer of R I'd

...l at uni-bayreuth.de>, Thomas Stabla <statho3 at web.de>, Florian Camphausen <fcampi at gmx.de> Maintainer: Peter Ruckdeschel <peter.ruckdeschel at uni-bayreuth.de> Description: S4 Classes for Distributions Depends: R (>= 1.9.0), (version for 1.8.x on URL cited below), setRNG (>= 2004.3-1) License: GPL version 2 or later URL: http://www.uni-bayreuth.de/departments/math/org/mathe7/DISTR/ Reference: http://www.uni-bayreuth.de/departments/math/org/mathe7/DISTR/distr.pdf We look forward to receiving questions, comments and suggestions Peter Ruckdeschel Matthias Koh...

...yreuth.de>, Thomas Stabla <statho3 at web.de>, Florian Camphausen <fcampi at gmx.de> Maintainer: Peter Ruckdeschel <peter.ruckdeschel at uni-bayreuth.de> Description: S4 Classes for Distributions Depends: R (>= 2.0.1), (versions for <=2.0.0, on URL cited below), setRNG (>= 2004.3-1) License: GPL version 2 or later URL: http://www.uni-bayreuth.de/departments/math/org/mathe7/DISTR/ Reference: http://www.uni-bayreuth.de/departments/math/org/mathe7/DISTR/distr.pdf We look forward to receiving questions, comments and suggestions Peter Ruckdeschel Matthias Kohl...

...l at uni-bayreuth.de>, Thomas Stabla <statho3 at web.de>, Florian Camphausen <fcampi at gmx.de> Maintainer: Peter Ruckdeschel <peter.ruckdeschel at uni-bayreuth.de> Description: S4 Classes for Distributions Depends: R (>= 1.9.0), (version for 1.8.x on URL cited below), setRNG (>= 2004.3-1) License: GPL version 2 or later URL: http://www.uni-bayreuth.de/departments/math/org/mathe7/DISTR/ Reference: http://www.uni-bayreuth.de/departments/math/org/mathe7/DISTR/distr.pdf We look forward to receiving questions, comments and suggestions Peter Ruckdeschel Matthias Koh...

...yreuth.de>, Thomas Stabla <statho3 at web.de>, Florian Camphausen <fcampi at gmx.de> Maintainer: Peter Ruckdeschel <peter.ruckdeschel at uni-bayreuth.de> Description: S4 Classes for Distributions Depends: R (>= 2.0.1), (versions for <=2.0.0, on URL cited below), setRNG (>= 2004.3-1) License: GPL version 2 or later URL: http://www.uni-bayreuth.de/departments/math/org/mathe7/DISTR/ Reference: http://www.uni-bayreuth.de/departments/math/org/mathe7/DISTR/distr.pdf We look forward to receiving questions, comments and suggestions Peter Ruckdeschel Matthias Kohl...

...ums checked package 'ucminf' successfully unpacked and MD5 sums checked package 'Rcgmin' successfully unpacked and MD5 sums checked package 'Rvmmin' successfully unpacked and MD5 sums checked package 'minqa' successfully unpacked and MD5 sums checked package 'setRNG' successfully unpacked and MD5 sums checked package 'optimx' successfully unpacked and MD5 sums checked The downloaded packages are in C:\Documents and Settings\mycomputer\Local Settings\Temp\Rtmpd7resh\downloaded_packages after that, I have tried the following example from the...