search for: sessioninfos

The printing of the locale information from sessionInfo is not very tidy. Using toLatex(sessionInfo) pretty much guarantees "badness" from breaking the margin boundary (though my version of TeX no longer reports such errors). A random example is here: http://cran.r-project.org/web/packages/Matrix/vignettes/Design-issues.pdf I find the locale information unnecessary and right now I hack

In a private response to Tony Plate's suggestion to replace version() output with sessionInfo() in R-help requests, > roger koenker wrote: >> Thanks for this, it would seem useful to have version numbers for >> the packages too? and Tony replied, > > Sounds sensible to me! If I were you I'd send a message to R-devel > suggesting this. AFAIK, some changes to

Some changes have been made to the posting guide, based on suggestions from various R-help contributors over the past year. The most significant change is the recommendation to use 'sessionInfo()' rather than 'version' when asking questions about unexpected behavior or bugs. This change was made because 'sessionInfo()' reports the version and a list of packages

Hi, sessionInfo() has been proven really useful, but you still often have to ask for additional information in order to help troubleshooting. For instance, for troubleshooting the aroma.affymetrix, it is very helpful to know what the current working directory is, for other packages certain system environment variables might be useful and so on. One solution could be to provide support for hook

Hi All, I was wondering if there would be any interest in adding an option to the "save" function in R that I think would be useful. I was thinking that it might be useful to have an option that would generate a ".sessionInfo" variable that contains the output of "sessionInfo()", and adds it to the list of objects to be saved. This way, whenever an RData object is

Dear all I am writing an Sweave document and have encountered formatting issues with the "locale" part of toLatex(sessionInfo()). The fact that there is no spaces between the various "locale" variables means that LaTeX cannot easily find an appropriate place to break the lines, and some will get printed off screen. Below is the text output, and this .pdf document [1] shows the

[Using R 2.7.2 on Windows XP] After re-building our heplots package, I've begun to get the following error from sessionInfo(), even though it passes R CMD check and builds without errors: > sessionInfo() Error in x$Priority : $ operator is invalid for atomic vectors In addition: Warning message: In FUN(c("MASS", "heplots", "car", "rgl",

Each of the following calls crash ("core dumps") R (R --vanilla) on various versions and OSes: regexpr("a{2-}", "") sub("a{2-}", "") gsub("a{2-}", "") EXAMPLES: > sessionInfo() R version 2.11.1 Patched (2010-09-16 r52949) Platform: i386-pc-mingw32 (32-bit) ... > regexpr("a{2-}", "") Assertion

Each of the following calls crash ("core dumps") R (R --vanilla) on various versions and OSes: regexpr("a{2-}", "") sub("a{2-}", "") gsub("a{2-}", "") EXAMPLES: > sessionInfo() R version 2.11.1 Patched (2010-09-16 r52949) Platform: i386-pc-mingw32 (32-bit) ... > regexpr("a{2-}", "") Assertion

Hello, very basic question from a user who is baffled by the workings of computers in general When logging off R, a dialog box asked if I wanted to save my log, I chose yes. Then I noticed that the following message appeared in the Command Window Error in saveLog(currentLogFileName) : unused argument(s) ("C:/Documents and Settings/prewpj/My Documents/Data/Analyses/Healthcare/Hand Care

setTimeLimit(elapsed=1) causes a timeout error whenever a call takes more than one second. For instance, this is how it works on Windows (R 3.3.1): > setTimeLimit(elapsed=1) > Sys.sleep(10); message("done") Error in Sys.sleep(10) : reached elapsed time limit Also, the error propagates immediately and causes an interrupt after ~1 second; > system.time({ Sys.sleep(10);

Dear R devels Yesterday I was slightly surprised to notice that R incorrectly detected some of the locale settings. I am not sure whether this is important, but I preferred to drop a message. In the R output below, some entries that should have been "en_GB.UTF-8" are presented as "C". Regards Liviu > sessionInfo() R version 2.9.1 (2009-06-26) x86_64-pc-linux-gnu locale:

Hi, I wonder if this is something on my machine locally or R in general. When I do the following: > plot(c(0,1),c(0,1),main=expression(paste(symbol("D"),"D",sep=""))) I get a plot with a title having uppercase delta followed by "D". But in the following > pdf(file="deltaTest.pdf") >

For 'R CMD check', it appears that option '--outdir' is not recognized and generates warning "unknown option '--outdir'". R CMD check --help says: Usage: R CMD check [options] pkgs [...] Options: [...] -o, --outdir=DIR directory used for logfiles, R output, etc. (default is 'pkg.Rcheck' in current directory,

Dear R People: Hello again. I'm trying to have 3 graphics windows visible simultaneously. I set up a zoo series. Then I plot the original series. I use the locator function to select 2 values from the original series, which generates a subset of the original series. Next, I plot the subset. The last step is to produce an EWMA chart from the subset series. Fair enough. I've tried

Recently I was trying to cite a package where the authors have ? and ? in their names. I found that on Windows the citation() function did not return the authors' names at all, but on Linux there was no problem (sessionInfos at the bottom): On Windows, no author names are returned: #--------------- > citation("readr") To cite package ?readr? in publications use: (2017). readr: Read Rectangular Text Data. R package version 1.1.1. https://CRAN.R-project.org/package=readr A BibTeX entry for LaTeX...

minimal reproducible example plot(1,1) identify(1,1) # or locator() now, trying to close the window by clicking on the cross of the upper right corner causes Rgui (and Rterm) to crash. I see the same behaviour on 2 different Windows PC (one with Win 8.1 and one with Win 10). I did not see the problem in linux (see below) WINDOWS ************** > sessionInfo() R version 3.3.0 beta

Hi, All: Attached please find a symmetric, indefinite matrix for which 'eigen(...)$vectors' included NAs: > load("eigenBug.Rdata") > sum(is.na(eigen(eigenBug)$vectors)) [1] 5670 > sessioninfo() Error: could not find function "sessioninfo" > sessionInfo() R version 2.4.1 (2006-12-18) i386-pc-mingw32 locale: LC_COLLATE=English_United

Hi, > url <- "ftp://ftp.ncbi.nlm.nih.gov/genomes/ASSEMBLY_REPORTS/All/GCF_000001405.13.assembly.txt" > download.file(url, tempfile()) trying URL 'ftp://ftp.ncbi.nlm.nih.gov/genomes/ASSEMBLY_REPORTS/All/GCF_000001405.13.assembly.txt' Error in download.file(url, tempfile()) : cannot open URL

Dear list, I have a lot of troubles installing Rgraphviz. I installed graphviz 2.13 from "graphviz-2.13.20061222.0540.tar" I installed the library Rgraphviz > getBioC("Rgraphviz") Running biocinstall version 2.0.8 with R version 2.5.0 Your version of R requires version 2.0 of Bioconductor. trying URL '