search for: seqr

Displaying 9 results from an estimated 9 matches for "seqr".

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2010 Aug 08
2
Importing arguments for use by functions in a script
...long the lines of the following (yes, I am new to R): rm(list= ls()) systime1<-system.time(source("seq_imp_fct.R")) systime2<-system.time(source("pattern_fct.R")) systime3<-system.time(source("AAdistribution_fct.R")) # run function systime101<-system.time(seqres<-seq_imp_fct("testprot.txt")) systime102<-system.time(patres<-pattern_fct(pattern="SS{1,2}",sequences=seqres)) systime103<-system.time(AAres<-AAdistribution_fct(sequences=patres)) As my list is of functions is growing, I was attempting to write a script that w...
2013 Jul 01
1
[PATCH v2] xfstests: btrfs/316: cross-subvolume sparse copy
...$0` +echo "QA output created by $seq" + +here=`pwd` +tmp=/tmp/$$ +status=1 # failure is the default! +trap "_cleanup; exit \$status" 0 1 2 3 15 + +_cleanup() +{ + umount $SCRATCH_MNT + rm -rf $TESTDIR1 + rm -rf $TESTDIR2 + btrfs subvolume delete $SUBVOL1 >> $seqres.full + btrfs subvolume delete $SUBVOL2 >> $seqres.full + cd / + rm -f $tmp.* +} + +# get standard environment, filters and checks +. ./common/rc +. ./common/filter + +# real QA test starts here +_supported_fs btrfs +_supported_os Linux + +_require_scratch +_require_cp_reflink + +_c...
2013 Nov 15
7
[PATCH 1/2] xfstests: add generic/321 to test fsync() on directories V2
...uot; 0 1 2 3 15 # get standard environment, filters and checks . ./common/rc . ./common/filter +. ./common/dmflakey # real QA test starts here _supported_fs generic @@ -63,49 +60,12 @@ _require_dm_flakey [ -x $here/src/fsync-tester ] || _notrun "fsync-tester not build" rm -f $seqres.full -BLK_DEV_SIZE=`blockdev --getsz $SCRATCH_DEV` -FLAKEY_DEV=/dev/mapper/flakey-test SEED=1 testfile=$SCRATCH_MNT/$seq.fsync -FLAKEY_TABLE="0 $BLK_DEV_SIZE flakey $SCRATCH_DEV 0 180 0" -FLAKEY_TABLE_DROP="0 $BLK_DEV_SIZE flakey $SCRATCH_DEV 0 0 180 1 drop_writes" -_TEST_OP...
2013 Jul 02
6
[PATCH v3] xfstests: btrfs/316: cross-subvolume sparse copy
...$0` +echo "QA output created by $seq" + +here=`pwd` +tmp=/tmp/$$ +status=1 # failure is the default! +trap "_cleanup; exit \$status" 0 1 2 3 15 + +_cleanup() +{ + umount $SCRATCH_MNT + rm -rf $TESTDIR1 + rm -rf $TESTDIR2 + btrfs subvolume delete $SUBVOL1 >> $seqres.full + btrfs subvolume delete $SUBVOL2 >> $seqres.full + cd / + rm -f $tmp.* +} + +# get standard environment, filters and checks +. ./common/rc +. ./common/filter + +# real QA test starts here +_supported_fs btrfs +_supported_os Linux + +_require_scratch +_require_cp_reflink + +_c...
2013 Oct 28
0
[PATCH] xfstests: add generic/320 to test fsync() on directories V2
...uot; 0 1 2 3 15 # get standard environment, filters and checks . ./common/rc . ./common/filter +. ./common/dmflakey # real QA test starts here _supported_fs generic @@ -63,49 +60,12 @@ _require_dm_flakey [ -x $here/src/fsync-tester ] || _notrun "fsync-tester not build" rm -f $seqres.full -BLK_DEV_SIZE=`blockdev --getsz $SCRATCH_DEV` -FLAKEY_DEV=/dev/mapper/flakey-test SEED=1 testfile=$SCRATCH_MNT/$seq.fsync -FLAKEY_TABLE="0 $BLK_DEV_SIZE flakey $SCRATCH_DEV 0 180 0" -FLAKEY_TABLE_DROP="0 $BLK_DEV_SIZE flakey $SCRATCH_DEV 0 0 180 1 drop_writes" -_TEST_OP...
2023 Apr 21
1
[PATCH] ocfs2: fix missing reset j_num_trans for sync
..._scratch 54 md5sum $testdir/file2 | _filter_scratch 55 56 echo "CoW and unmount" 57 sync 58 _dmerror_load_error_table 59 urk=$($XFS_IO_PROG -f -c "pwrite -S 0x63 -b $bufsize 0 $filesize" \ 60 -c "fdatasync" $testdir/file2 2>&1) 61 echo $urk >> $seqres.full 62 echo "$urk" | grep -q "error" || _fail "pwrite did not fail" 63 64 echo "Clean up the mess" 65 _dmerror_unmount ``` After line 49 50 umount & mount ocfs2 dev, this case run md5sum to verify target file. line 57 run 'sync' before lin...
2023 Apr 22
1
[PATCH] ocfs2: fix missing reset j_num_trans for sync
...er_scratch > 55 > 56 echo "CoW and unmount" > 57 sync > 58 _dmerror_load_error_table > 59 urk=$($XFS_IO_PROG -f -c "pwrite -S 0x63 -b $bufsize 0 $filesize" \ > 60 -c "fdatasync" $testdir/file2 2>&1) > 61 echo $urk >> $seqres.full > 62 echo "$urk" | grep -q "error" || _fail "pwrite did not fail" > 63 > 64 echo "Clean up the mess" > 65 _dmerror_unmount > ``` > > After line 49 50 umount & mount ocfs2 dev, this case run md5sum to > verify target...
2013 May 20
1
[PATCH] xfstests: btrfs 308: regression test for btrfs send
...uld have received a copy of the GNU General Public License +# along with this program; if not, write the Free Software Foundation, +# Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA +# +#----------------------------------------------------------------------- +# + +seq=`basename $0` +seqres=$RESULT_DIR/$seq +echo "QA output created by $seq" + +here=`pwd` +tmp=/tmp/$$ +status=1 # failure is the default! + +_cleanup() +{ + rm -f $tmp.* +} + +trap "_cleanup ; exit \$status" 0 1 2 3 15 + +# get standard environment, filters and checks +. ./common/rc +. ./common/fi...
2023 Apr 30
2
[PATCH 1/2] ocfs2: fix missing reset j_num_trans for sync
..._scratch 54 md5sum $testdir/file2 | _filter_scratch 55 56 echo "CoW and unmount" 57 sync 58 _dmerror_load_error_table 59 urk=$($XFS_IO_PROG -f -c "pwrite -S 0x63 -b $bufsize 0 $filesize" \ 60 -c "fdatasync" $testdir/file2 2>&1) 61 echo $urk >> $seqres.full 62 echo "$urk" | grep -q "error" || _fail "pwrite did not fail" 63 64 echo "Clean up the mess" 65 _dmerror_unmount ``` After line 49 50 umount & mount ocfs2 dev, this case run md5sum to verify target file. Line 57 run 'sync' before lin...