search for: rsjava

...mpiler (gcc ) is a cross-compiler... no checking whether we are using GNU C... yes checking whether gcc accepts -g... yes checking for Rf_initEmbeddedR in -lR... no No R shared library found updating cache ./config.cache creating ./config.status creating Makevars creating src/Makevars creating src/RSJava/Makefile creating Makefile_rules creating inst/scripts/RJava.bsh creating inst/scripts/RJava.csh creating R/zzz.R creating cleanup creating inst/scripts/RJava Copying the cleanup script to the scripts/ directory Building libRSNativeJava.so in /tmp/R.INSTALL.30363/SJava/src/RSJava if test ! -d /usr...

...s checking whether gcc accepts -g... yes checking for gcc option to accept ANSI C... none needed checking for Rf_initEmbeddedR in -lR... no No R shared library found configure: creating ./config.status config.status: creating Makevars config.status: creating src/Makevars config.status: creating src/RSJava/Makefile config.status: creating Makefile_rules config.status: creating inst/scripts/RJava.bsh config.status: creating inst/scripts/RJava.csh config.status: creating R/zzz.R config.status: creating cleanup config.status: creating inst/scripts/RJava Copying the cleanup script to the scripts/ directo...

...s checking whether gcc accepts -g... yes checking for gcc option to accept ANSI C... none needed checking for Rf_initEmbeddedR in -lR... no No R shared library found configure: creating ./config.status config.status: creating Makevars config.status: creating src/Makevars config.status: creating src/RSJava/Makefile config.status: creating Makefile_rules config.status: creating inst/scripts/RJava.bsh config.status: creating inst/scripts/RJava.csh config.status: creating R/zzz.R config.status: creating cleanup config.status: creating inst/scripts/RJava Copying the cleanup script to the scripts/ directo...

...t GUI and R, I would say that personnaly, I need to build a nice GUI for people who does not know anything about R, to conduct simulations. I don't know if the choice of R is the best. Maybe writing all the code in Java would be better... I don't know. That's why I have tried to install RSJava from Omegahat on my computer (Windows 2000). With R 1.5.0 or 1.5.1, I get the following error message: Error in .Defunct() : `.Alias' is defunct. See ?Defunct. May I change a particular file in the SJava library to make correct paths for Windows? Thank you for your help, Tristan Lorino ----...

...m finding installing SJava (which I need for RMAGEML) very frustrating indeed. I am running rw2001 on WindowsXP with Java - jre1.5.0_02. Could somebody please explain to me step-by-step how to install it as I have tried all the help files. The website’s (HYPERLINK "http://www.omegahat.org/RSJava/"http://www.omegahat.org/RSJava/) instructions for installing the Windows source are definitely not Windows commands (are they UNIX? The file is not even a zip as stated in the instructions!). I have also tried using the command “R CMD INSTALL HYPERLINK "http://www.omegahat.org/RSJav...

Hi,all, I have a problem about launching SJava in R from external application (Cytoscape). My R version is 2.1.0 and Sjava version is 0.68. R is installed by issuing 1. configure --enable-R-shlib 2. make 3. make check 4. make install SJava is installed by issuing "R CMD INSTALL -c SJava_version_.tar.gz". The LD_LIBRARY_PATH is set in .bash_profile by

Hi, I have installed the SJava package (see http://www.omegahat.org/RSJava/ ) without any problem. I was able to run the examples (see http://www.omegahat.org/RSJava/examples/index.html ) from R, on my “R Linux server” and directly on the display of the server, But, if I run theses examples on an “X11 client”, under Linux or windows, with a “correct configuration...

hello, I am trying to install SJava on Windows XP as described on http://www.omegahat.org/RSJava/: at the level configure.win: $rhome/sjava/configure.win returned "argument 'c:/...' ignored" When i tried to install like the readme file, it returned in R > library(SJava) using JAVA_HOME = C:\Program Files\Java\j2re1.4.2_04 > .JavaInit() Error in .JavaInit() : Could...

Hi there. I am trying to install SJava on my windows xp machine. I downloaded the windows source file SJava_0.69-0.tar.gz from the web site http://www.omegahat.org/RSJava/ I have folloed the XP command line instructions as directed in the table underneath the download link: cd $RHOME/src/library unzip SJava_0.69-0.zip cd SJava ./configure.win $RHOME cd $RHOME/src/gnuwin32 make pkg-SJava I reconfigured the configure.win file so that the correct java sdk was refer...

...ere is Rgui.exe still running in the background (i.e. W2K's task manager recognises it only as a process, which apparently is using almost 100% of the CPU). I can reproduce that by "using" the SJava package (from Brian Ripley's homepage, as suggested on http://www.omegahat.org/RSJava/). When loading the package, and running the ttest example, my Rgui.exe crashes, and I end up with the process Rgui.exe still alive using the CPU extensively. The same happens on my stand-alone machine at home (with the same OS and R versions but newest Sun JDK). Any comments greatly apprecia...

...n tcltk and want to port it in Java (because there are some other functionalities that have already been developed in Java and want to extend existing functionalities). The problem is that there does not seem to be an easy way to invoke R inside a Java program. I know there is a library called RSJava that is supposed to help this kind of situation but what I found was that it seemed to work only in Unix environment and it seemed to focus mainly users that try to use Java in R not users try to use R in Java. What will be the best solution? Thanks in advance, Tae-Hoon Chung, Ph.D Post-doctor...

Hi, I'm using the SJava package and am trying to get event handling to work, but no examples from http://www.omegahat.org/RSJava/examples/ that have any event handling work in R 1.9.0. I think the examples were all written around 2001 so most probably used an older version of R. The error message that displays in R is: Error: 'restart' is defunct. See ?Defunct. The restart function (part of the base package I th...

I am trying to download and install Omegahat Sjava (http://www.omegahat.org/RSJava) to be able to call R from within Java. The install instructions are as follows: cd $RHOME/src/library unzip SJava_0.69-0.zip cd SJava ./configure.win $RHOME cd $RHOME/src/gnuwin32 make pkg-SJava However, my command prompt won't recognize "unzip","./configure.wi...

Hi again! I'm trying to download SJava from the http://www.omegahat.org/RSJava/ website. I'm trying to get the binary. I download the version from BDR's website. When I unzip the file via unzip.exe, the new folder appears as SJAVA (upper case). >library(SJava) Error in library(SJava) : There is no package called 'SJava' >library(SJAVA) Error in li...

Dear Expects, I tried to install the SJava package to the Library subdirectory of my R1.5.0. However, when I tried it according to the instructions from http://www.omegahat.org/RSJava/, I got the following error messages: library(SJava) Error in .Defunct() : `.Alias' is defunct. See ?Defunct. >.JavaInit() Error: couldn't find function ".JavaInit" I downloaded SJavaWin 0.62-8.zip, and unzip it under Window systems. Any help is appreciated. Charlie Liu Gr...

...wait... Installing package(s) into ‘C:\Users\Hp\Documents/R/win-library/2.12’ (as ‘lib’ is unspecified) Mensajes de aviso perdidos In getDependencies(pkgs, dependencies, available, lib) : package ‘SJava’ is not available And I have also tried the instructions: found in http://www.omegahat.org/RSJava/. cd *$RHOME*/src/library unzip SJava_0.69-0.zip cd SJava ./configure.win $RHOME cd *$RHOME*/src/gnuwin32 make pkg-SJava But when I tried the line unzip SJava_0.69-0.zip it tells me the command cannot be recognized. If I unzip the file manually and then try the line ./configure.win...

I am not a techie and have been struggling 2 days solid to try and install SJava (the source from http://www.omegahat.org/RSJava/). Does anybody have a binary file for me (I am Windows XP and rw2001)? I have tried installing Perl, mingwin and the cygwin tools but still no luck. When I try “R CMD INSTALL c:\SJava_0.78-0.tar.gz” I get the following (and haven’t a clue what it could mean): ---------Making package SJava-----...

Dear R-helpers, I run R version 2.8.1 (2008-12-22) on i386-apple-darwin8.11.1 I would like to call R from Java. I downloaded SJava_0.69-0.tar.gz, and then issued the command suggested on http://www.omegahat.org/ RSJava/ : % R INSTALL -c SJava_0.69-0.tar.gz ARGUMENT 'INSTALL' __ignored__ WARNING: unknown option '-c' ARGUMENT 'SJava_0.69-0.tar.gz' __ignored__ I then tried % R CMD INSTALL SJava_0.69-0.tar.gz * Installing to library '/Library/Frameworks/R.framework/Resources/ library...

...t, been there, done that) Environment: RWin 1.5.1 (install from binaries) OS Win 2000 SP3 jdk 1.4.0 (could this be it?? I saw requirement for 1.2 or 1.3 - I wouldn't think this is the problem) SJavaWin_0.62-8 binary (. . . what else?) Install procedure: 1. According to http://www.omegahat.org/RSJava/#Download, cd $RHOME/library unzip SJavaWin_0.62-8.zip 2. did that 3. got .Defunct error. email suggested changing SJava file in {R_HOME}/library/SJava/R 4. did that 5. tried .JavaInit() Attempts to solve problem: 1. Read the FAQ. Not much here on this one, although several emails requesting help...

Hello I m tryng to execute the code below and I have a problem with the R-Java connection.: import org.omegahat.R.Java.*; public class REvalSample { public static void main(String [] args) { String [] rargs = {"--slave", "--vanilla"}; System.out.println("Sample program to call R engine from Java"); ROmegahatInterpreter interp = new