search for: rmd

...ng a shutdown, xm destroy and xm create, I was able to get around that problem. Signed-off-by: Don Fry <brazilnut@us.ibm.com> --- tools/ioemu/hw/orig.pcnet.h 2006-03-24 12:08:37.000000000 -0800 +++ tools/ioemu/hw/pcnet.h 2006-03-24 12:16:02.000000000 -0800 @@ -177,6 +177,26 @@ struct pcnet_RMD { } rmd3; }; +typedef struct PCNetState_st PCNetState; + +struct PCNetState_st { + PCIDevice dev; + NetDriverState *nd; + int mmio_io_addr, rap, isr, lnkst; + target_phys_addr_t rdra, tdra; + uint8_t prom[16]; + uint16_t csr[128]; + uint16_t bcr[32]; + uint64_t t...

...rror: $ R CMD build pkgW2vignettes * checking for file ?pkgW2vignettes/DESCRIPTION? ... OK * preparing ?pkgW2vignettes?: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR Error: processing vignette 'vignette2word_document.Rmd' failed with diagnostics: Failed to locate the ?weave? output file (by engine ?knitr::rmarkdown?) for vignette with name ?vignette2word_document?. The following files exist in directory ?.?: ?vignette1createsObject1.R?, ?vignette1createsObject1.Rmd?, ?vignette1createsObject1.html?, ?vignet...

...ather than ERROR on purpose, or an error??? If the former, will adding a search for "Quitting from" suffice? By the way, the failure shown was an (uncaught) bug in cox.zph wrt putting dimnames on one of the result matrices. Terry T ---------------------- --- re-building ?timeSplitter.Rmd? using rmarkdown Loading required package: forestplot Loading required package: grid Loading required package: checkmate Loading required package: Gmisc Loading required package: Rcpp Loading required package: htmlTable Attaching package: 'dplyr' The following objects are masked from '...

...g-directory "adv-r-master". However, the script build-book.r is located in the directory "book", which is located in directory "adv-r-master". Therefore, pathes starting at "." are wrong (should start at ".."). 2. Some file names have endings "Rmd", but e.g. in the line "chapters <- dir(".", pattern = "\\.rmd$")" these endings are named "rmd". Therefore, the files (e.g. "base-types.Rmd") cannot be found. Pandoc I have installed. Maybe there will arise further problems, but still I a...

...ir) : vignette builder 'knitr' not found So I installed the knitr package and all its dependents (?mime?, ?stringi?, ?magrittr?, ?evaluate?, ?formatR?, ?highr?, ?markdown?, ?stringr?, ?yaml?) . Now I get some different warnings: Running vignettes for package ?digest? Running ?sha1.Rmd? Warning messages: 1: In readLines(if (is.character(input2)) { : cannot open file 'sha1.Rmd': No such file or directory 2: In engine$weave(file, quiet = TRUE, encoding = enc) : The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Plea...

Thanks, Duncan. The files in question are Emacs Org-mode files, and I think these are more or less isomorphic to Rmd files, but I haven't used Org-mode in a long time, so I think the mapping (Org-mode ==> Rmd) would be painful. -- Mike On Mon, Feb 19, 2018 at 1:20 AM, Duncan Murdoch <murdoch.duncan at gmail.com> wrote: > On 18/02/2018 9:06 PM, Michael Hannon wrote: >> >> Greetings....

On Wed, 14 Mar 2018, Jeff Newmiller wrote: > Nothing you have said tells me you have LaTeX working (a binary install of > R does not depend on it), but if you actually know it is installed and > available to R then that isn't the problem. Since you have not said what > you actually did or what errors you encountered I can only shrug and > suggest that that the website is a

Greetings. The group that I work with has just started using the approach outlined in Karl Broman's handy primer: http://kbroman.org/pkg_primer/pages/vignettes.html to create vignettes for a couple of R packages. This works fine as long as we have a current Rmd version of the vignette. But we have some old PDF documents that we'd like to include as vignettes as well. I'd like to know if there's a way to include such PDF files as vignettes. We *do* have the source files for the PDF files in question, but it would be tedious to convert those s...

Hola. Pare que RStudio y el paquete markdown no nos terminamos de entender. - Creo un fichero Rmd, con el botón: "Kntr to Html" (ctr+Shift+Y), se pre-visualiza genial: formulas (, highlight_code,...)... todo bien. Pero quiero ponerle un TOC tb, así que como en su día me comento Jose Luis Cañadas en este foro, hago un desde el fichero md que crea la previsualización ("Kntr to...

Hi, as far as I understand it, the new R devel feature of processing non-Sweave vignettes will (a) locate any "[.][RrSs](nw|tex)$" or ".Rmd" files, (b) check for a registered vignette engine, (c) process the file using the registered "weave" function, (d) and possibly post process the generated weave artifact (e.g. a *.tex file). I'd like to propose to extend this non-Sweave mechanism to allow for any filename patte...

...reproducible on your machine. remove.packages("INBOmd") devtools::install_github("inbo/INBOmd at post_processor") setwd(system.file("rmarkdown/templates/rsos_article/skeleton", package = "INBOmd")) debug(INBOmd::rsos_article) rmarkdown::render("skeleton.Rmd") The sign that post_processor() fails when the tex file still contains \EndFirstPage resulting in the compilation error "Undefined control sequence. l.128 \EndFirstPage" I still get the error with the current version of the code. Running the post_processor manually works. eval(pa...

...".png", sep = ""), width=600, wheigth=675) lapply(1:ncol(pcmat), function(x) { ... }) dev.off()} ``` Thank you for your time, Alex -- View this message in context: http://r.789695.n4.nabble.com/Produce-HTML-reference-in-knitr-using-rmd-tp4669954.html Sent from the R help mailing list archive at Nabble.com.

I am trying to get rmarkdown with bookdown to include a table of contents in html output, and having trouble. Here is an example that I think illustrates the trouble. I have a file "test.Rmd" as follows: [127]% cat test.Rmd --- title: Test Document output: html_document: toc: true --- # Introduction some text # A section some more text [128]% If I run: library(rmarkdown) render('test.Rmd') I get a table of contents in the html file (test.html). Nice. Howev...

...s("INBOmd") >> devtools::install_github("inbo/INBOmd at post_processor") >> setwd(system.file("rmarkdown/templates/rsos_article/skeleton", package = >> "INBOmd")) >> debug(INBOmd::rsos_article) >> rmarkdown::render("skeleton.Rmd") > > I'm not sure you would normally have write access in that directory, so > it may not be typical of what you'd see in a user directory. I > certainly see something different when I copy the skeleton.Rmd file (and > nothing else) to my own temp directory. > &gt...

...udio/bin/pandoc/pandoc" +RTS -K512m -RTS Evolución_de_los_Mercados_.utf8.md --to latex --from markdown+autolink_bare_uris+ascii_identifiers+tex_math_single_backslash-implicit_figures --output Evolución_de_los_Mercados_.pdf --template "C:\Users\CONNY\Documents\R\win-library\3.2\rmarkdown\rmd\latex\default.tex" --highlight-style tango --latex-engine pdflatex --variable "geometry:margin=1in"' tiene estatus 43 Ejecución interrumpida Asimismo, si lo quiero generar como html sería para publicarlo en mi sitio web, le dí en la opción publicar y salió que requería instalar c...

...are build when executing R CMD build I did place the child documents in /inst/ParametrizedReportChid/ so they are excluded from the build. I do reference them from the markdown file in the vignette folder by: ```{r referencingChildDocument} child_docs <- "Grp2Analysis_MissingInOneCondtion.Rmd" if(!sum(NAinfo$nrProteins > 0) > 0){ child_docs <- "Grp2Analysis_Empty.Rmd" } child_docs <- system.file("ParametrizedReportsChild",child_docs,package = "SRMService") ``` ```{r includeMissingInOne, child = child_docs} ``` When running devtools::cle...

...olski wrote: > Dear Yihui, > > Thank you for the valuable questions. > > sample_analysis is a "tibble" while > configuration is an "R6" class. > But I also have parametrized reports where I pass R reference classes > as arguments. > > This is the Rmd yaml params part corresponding to the error message. > > params: > configuration: !r get(data(skylineconfig)) > data: !r get(data(sample_analysis)) > > Might the R6 class which I pass to configuration the source of the > problem here? I have heard somewhere that R6 us...

...> remove.packages("INBOmd") > devtools::install_github("inbo/INBOmd at post_processor") > setwd(system.file("rmarkdown/templates/rsos_article/skeleton", package = > "INBOmd")) > debug(INBOmd::rsos_article) > rmarkdown::render("skeleton.Rmd") I'm not sure you would normally have write access in that directory, so it may not be typical of what you'd see in a user directory. I certainly see something different when I copy the skeleton.Rmd file (and nothing else) to my own temp directory. > > The sign that post...

...file. Any suggestions on what I'm doing wrong? Below is the relevant snippet of the code. The full code is available at https://github.com/inbo/INBOmd/blob/post_processor/R/rsos_article.R https://github.com/inbo/INBOmd/blob/post_processor/inst/rmarkdown/templates/rsos_article/skeleton/skeleton.Rmd is an Rmd is a MWE that fails compile because the post_processor() is not run. Best regards, Thierry post_processor <- function( metadata, input_file, output_file, clean, verbose ) { text <- readLines(output_file, warn = FALSE) # set correct text in fmtext environment...

...) >>> devtools::install_github("inbo/INBOmd at post_processor") >>> setwd(system.file("rmarkdown/templates/rsos_article/skeleton", package = >>> "INBOmd")) >>> debug(INBOmd::rsos_article) >>> rmarkdown::render("skeleton.Rmd") >>> >> >> I'm not sure you would normally have write access in that directory, so >> it may not be typical of what you'd see in a user directory. I >> certainly see something different when I copy the skeleton.Rmd file (and >> nothing else) to...