search for: r_shell

First I tried 'setenv R_SHELL /usr/local/bin/bash', as bash is the weapon of choice for the faculty wishing to use R, then ran ./configure as before. The ./configure output line using as R_SHELL for scripts ... /usr/local/bin/bash would seem to indicate that the R_SHELL environment variable was recognized and acknowledge...

Dear friends of R, I want to produce a pdf file with the contents of a matrix. I employ the latex command in combination with dvi, both contained in the Hmisc package. It seems to me that the function does not correctly set the directory. > tbl.loc <- matrix(1:4, nc=2) > latex.obj <- latex(tbl.loc) > dvi(latex.obj) warning: extra args ignored after 'cd' H:\PROJECTS\data

I'm using R 1.6.1 on Windows 95 with cygwin bash as my shell. The 'shell' command tries to determine which shell the user prefers via the following steps: shell <- Sys.getenv("R_SHELL") if (!nchar(shell)) shell <- Sys.getenv("SHELL") if (!nchar(shell)) shell <- Sys.getenv("COMSPEC") For me, shell evaluates to "c:/cygwin/bin/bash.exe" . The 'shell' command then tries to determine the proper flag...

Dear all, I'm trying to compile R 2.9.1 on my home directory under debian, and as I need to play with RPy, I tryed compile R using: ./configure --enable-R-shlib But, during the compilation, I get the error below: ------------------------------------- using as R_SHELL for scripts ... /bin/sh configure: creating ./config.status config.status: creating Makeconf config.status: creating Makefile config.status: creating doc/Makefile config.status: creating doc/html/Makefile config.status: creating doc/html/search/Makefile config.status: creating doc/manual/Makefile c...

...usr/lib -L/usr/X11R6/lib" xlc -qversion IBM XL C/C++ for AIX, V12.1 (5765-J02, 5725-C72) Version: 12.01.0000.0011 xlC -qversion IBM XL C/C++ for AIX, V12.1 (5765-J02, 5725-C72) Version: 12.01.0000.0011 xlf -qversion IBM XL Fortran for AIX, V12.1 Version: 12.01.0000.0000 I have tried with R_SHELL set to bash and ksh. My login shell is bash. I have tried with enable static and disable shared. I have subsequently built without recommended packages. R build and installs. (Minor issue with the location of libRblas but I solved that. I have then tried doing a install.packages("Matrix&qu...

Dear R-experts, I run R in a shell under Emacs on Win2k using ESS. I get the following strange error > shell("copy c:\\file.txt c:\\newfile.txt") warning: extra args ignored after 'copy' Forkert syntaks for kommandoen. Warning message: cmd execution failed with error code 1 in: shell("copy c:\\file.txt c:\\newfile.txt") The same problem emerges independently of

Given: $JAVA_HOME=~/jdk1.7.0_40 $R_SHELL=/bin/sh $PATH=$R_HOME/bin:$JAVA_HOME/bin:... which jar --> ~/jdk1.7.0_40/bin/jar which javac --> ~/jdk1.7.0_40/bin/javac which javah --> ~/jdk1.7.0_40/bin/javah which java --> '', even though there is one in $JAVA_HOME/bin whereis java --> java: /bin/java /usr/bin/java /sbin...

I apologize for cross posting this message in the R-help group as well. Having posted it there a couple of hours ago, I felt this may be a more appropriate forum for a question of this type. Hello -- I am unable to build R 2.9.2 on IBM PowerPC AIX5.3. I would appreciate any help in this matter. ===============details============================== Machine: IBM PowerPC_POWER5 / 4 proc, 1499

I am trying to build R on a Centos server without admin privileges (or support), so I can call R functions from NetLogo models (via the NetLogo R extension or possibly Rserve), but I'm getting stuck near the end of make. Any suggestions? Here's the setup... $ R_SHELL=/bin/sh $ R_HOME=~/R-devel $ cd $R_HOME; ./configure; make returns ... begin installing recommended package MASS Error in untar2(tarfile, files, list, exdir, restore_times) : incomplete block on file make[2]: *** [MASS.ts] Error 1 make[2]: Leaving directory `/home1/optimal1/R-devel/src/li...

Hello -- I am trying to compile R-2.9.2 on IBM Power5 machine with AIX 5.3. I have posted three previous posts. Over time I have made significant progress towards getting a successful build. I am now getting the following error: ========================================================== begin installing recommended package mgcv * Installing *source* package 'mgcv' ... ** libs gmake[2]:

Hello, I am trying to build the R-2.11.1 software for university faculty to use in research projects on a DEC/Compaq/HP AlphaServer model GS160 16CPU/64GB memory running Tru64Unix aka OSF1 version 5.1B-5. Is it known whether it is possible to build the R-2.11.1 software on the platform I am using? In my attempts to build the R-2.11.1 software, I first used the native C and Fortran 77/90/95

...verbatim text. Currently only supported by parse_Rd() and Rd2HTML(). INSTALLATION o The shell used by the 'R' script and other shell scripts intended to be run directly can be specified at installation time by setting the (precious) configure variable R_SHELL. o libtool has been updated to 2.2.6a. o --with-ICU is now the default: this means that ICU will be used for collation on Mac OS >= 10.4. o make install-tests can be used to install the test files, to allowed an installed version of R to be tested -- see the...

...verbatim text. Currently only supported by parse_Rd() and Rd2HTML(). INSTALLATION o The shell used by the 'R' script and other shell scripts intended to be run directly can be specified at installation time by setting the (precious) configure variable R_SHELL. o libtool has been updated to 2.2.6a. o --with-ICU is now the default: this means that ICU will be used for collation on Mac OS >= 10.4. o make install-tests can be used to install the test files, to allowed an installed version of R to be tested -- see the...

...to hardcode library paths into programs... immediate checking for Fortran flag to compile .f90 files... none checking for Fortran flag to compile .f95 files... none checking for x86_64-alpine-linux-uclibc-gfortran option to support OpenMP... -fopenmp checking whether NLS is requested... no using as R_SHELL for scripts ... /bin/sh configure: creating ./config.status config.status: creating Makeconf config.status: creating Makefile config.status: creating doc/Makefile config.status: creating doc/html/Makefile config.status: creating doc/manual/Makefile config.status: creating etc/Makefile config.status...