search for: r_java_ld_library_path

Displaying 6 results from an estimated 6 matches for "r_java_ld_library_path".

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2008 Feb 13
2
Perils of R_LIBRARY_PATH
The R front end sets (via etc/ldpath) R_LIBRARY_PATH, including R_JAVA_LD_LIBRARY_PATH. Perhaps the later is too obliging, as I've just be caught by it in a way that took me a while to track down. One of my machines has a Sun jdk1.6.0* JDK installed, and as a result we have ${R_JAVA_LD_LIBRARY_PATH=${JAVA_HOME}/lib/amd64/server:${JAVA_HOME}/lib/amd64: ${JAVA_HOME}/../lib/amd6...
2011 Aug 06
3
rJava on Debian squeeze (or other versions of Linux)?
...ther version of linux)? I keep getting the ... (JDK) is missing or not registered in R error message when installing the package. I've tried running 'R CMD javareconf', setting JAVA_HOME and editing /etc/R/ldpaths by hand, but to no avail. The problem might be related to the R_JAVA_LD_LIBRARY_PATH that's set in /etc/R/ldpaths. Does anyone know what it's supposed to contain? I haven't been able to find any documentation on it? Searching the web, I've found many references to this problem, but no solutions. thanks, bw [[alternative HTML version deleted]]
2013 Jul 28
1
Problem with ldpaths in Ubuntu 13.04
Hello! I'm trying to install R-3.0.1 on an Ubuntu machine (64 bit, version 13.04). I have uninstalled and installed several times, but to no avail. I keep getting errors about missing ldpaths, and installing packages does not work at all. Here is the information: erin@erin-Lenovo-IdeaPad-Y480:~$ sudo apt-get install r-base Reading package lists... Done Building dependency tree Reading
2010 Aug 13
1
Installing rJava fails on Gentoo (amd64) with Sun JDK - checking JNI data types... error
Installing rJava fails consistently, whether installed via the command line as below, or through "install.packages( 'rJava' )", and whether 0.84 or 0.85 is used, with the message :- "checking JNI data types... configure: error: One or more JNI types differ from the corresponding native type. You may need to use non-standard compiler flags or a different compiler in order to
2009 Feb 21
1
Install failure (PR#13545)
...;' RBLAS_LDFLAGS='' READLINE_LIBS='' RLAPACK_LDFLAGS='' RMATH_HAVE_EXPM1='' RMATH_HAVE_LOG1P='' RMATH_HAVE_WORKING_LOG1P='' R_ARCH='' R_BATCHSAVE='' R_BROWSER='/usr/bin/open' R_DEFS='' R_GZIPCMD='//bin/gzip' R_JAVA_LD_LIBRARY_PATH='' R_LD_LIBRARY_PATH='' R_MODULES='' R_OS='linux-gnu' R_OSTYPE='unix' R_PAPERSIZE='letter' R_PDFVIEWER='/usr/bin/open' R_PLATFORM='x86_64-unknown-linux-gnu' R_PRINTCMD='' R_PROFILING='' R_RD4DVI='ae' R_RD4PDF=...
2009 Jul 09
2
How to Populate List
...> env | grep LD_LIBRARY_PATH > > to check that it's set correctly *BEFORE* you invoke R. There's nothing there.  However, you might have got me onto a workaround.  When I see this: $ diff /home/hrapgc/local/R-2.8.1/etc/ldpaths /home/hrapgc/local/R-2.9.1/etc/ldpaths 2c2 < : ${R_JAVA_LD_LIBRARY_PATH=/usr/lib/gcj-4.1.2:/home/hrapgc/Rstuff/library/asreml/libs} --- > : ${R_JAVA_LD_LIBRARY_PATH=/usr/lib/gcj-4.1.2} I think a little editing job will do the trick.  Presumably, that happened at compilation time and something screwy is happening with CentOS which doesn't happen with other OSs....