search for: pkgnames

Here is a small patch for OpenSSH 3.2.3p1.. When the package postinstall script runs, it presumes that the package will be installed relative to the current / directory.. If this package is installed as part of a Solaris Jumpstart installation, this will not be the case. Consequentially, the /etc/ssh/sshd_config.default will never get copied to /etc/ssh/sshd_config on the new operating system.

Dear useRs, Is it possible to get the R package usage statistics? That is, does R contain any tools to estimate which packages were used and how often? I am going to temporary change the workplace and packing the data and their processing scripts on my computer in order to continue my projects. During my work on the current workplace I periodically have had installed new R

I've made some changes to buildpkg.sh to make it easier for package builders to add their local changes. I'd like people that use buildpkg.sh to test and comment on these changes before I commit them to CVS. None of the defaults have changed. Some of the patch is is just moving chunks of code to a different location to make some of the enhancements work. Some things you may find

Hello, When I run R CMD build --binary pkgname I get * checking for file 'pkgname/DESCRIPTION' ... OK * preparing 'pkgname': * checking DESCRIPTION meta-information ... OK * cleaning src * removing junk files * checking for LF line-endings in source and make files * checking for empty or unneeded directories * building binary distribution * installing *source* package

Hi, I apologize for this often/old question. I found some hints but couldn't solve the problem so far. I have C functions (incl. the header files) as well as the R wrapper functions which I want to use for faster calculations. These functions are included in a R package. The installation process seems to be ok (no errors). I also can load the package without errors. But when I call the

sir i could not find the plant breeding libraray in Rgui3.0.0 [[alternative HTML version deleted]]

Hi All, I have recently created an Rcmdr plugin package and it passed all the checks and was uploaded to CRAN. I then downloaded it from CRAN and tried running it from my local R program and received this error: ... Error in f(libname, pkgname) : could not find function "getRcmdr" Error in library(pkg, character.only = TRUE) : .First.lib failed for 'RcmdrPlugin.MAc' In my

Hi R-devels, would it be possible to enhance either promptPackage() or the default indexing mechanism for packages so that -- if it exists -- (the contents of) file <pkgname>-package.Rd is sorted first in * the .dvi / .pdf documentation file * the .chm documentation file * the package 00index.html documentation file ? So far I found the following "hand-made" solution

...d to work for me until recently (unfortunately I cannot specify "recently" here...) Trying to install the created .zip file with utils:::menuInstallLocal() I get an error message " package 'distr' successfully unpacked and MD5 sums checked Error in unpackPkg(pkgs[i], pkgnames[i], lib) : malformed bundle DESCRIPTION file, no Contains field " Now AFAICS I have not tried to build a bundle ... Searching the help archives, I found a posting by Uwe Ligges, http://article.gmane.org/gmane.comp.lang.r.general/64574/ saying that R CMD INSTALL --build was pr...

A development note: In the function "install.packages", it would be helpful to those of us who have atypical installations and install manually from ZIP files to have pkgnames <- sub("\\.zip$", "", pkgnames) replaced with pkgnames <- sub("\\.zip$", "", pkgnames, ignore.case = TRUE) because the contributed zipfiles are ZIPfiles. The routine did not work for me out of the box. Jeremy Primer ------------------------------...

A development note: In the function "install.packages", it would be helpful to those of us who have atypical installations and install manually from ZIP files to have pkgnames <- sub("\\.zip$", "", pkgnames) replaced with pkgnames <- sub("\\.zip$", "", pkgnames, ignore.case = TRUE) because the contributed zipfiles are ZIPfiles. The routine did not work for me out of the box. Jeremy Primer ------------------------------...

Hello, The vignette concept, which started in Bioconductor, seems to be catching on. They are supported by R CMD build/check and documented in the Writing R Extensions manual. I think vignettes are a fantastic way to introduce new users to a package. However, getting new users to realize that a vignette is available can be challenging. For some time now, we have had a function in Biobase that

Hello All, Attached is a patch makes the following changes to contrib/aix relative to 3.1p1: * Gets version number from ssh -V as suggested by Tim Rice. * Does a better job of generating valid AIX package version numbers (fixes inutoc "format of the toc file is invalid" and "invalid level" errors reported by Mandar Mirashi). * Tests for "make install" failure and

Was looking at what was output for <pkgname>-package.Rd and wondered if any there was any means (via macro, etc) to merge some of the same information with a template for my package manpage? As much (all?) of the generated information was already provided in the DESCRIPTION, I'd prefer not to have to update the information in multiple places. I'm thinking here that I could provide a

It appears that the runtime for an R script can more than double if a few references to a function foo() are replaced by more explict references of the form pkgname::foo(). The more explicit references are of course required when two loaded packages define the same function. I can understand why use of this mechanism is not free in an interpreted environment like R, but the cost seems rather

Is there a way to query a package to see what dynamic shared libraries are loaded with it? The reason I ask is because during development, I want to unload libraries so that they can be reloaded without restarting R. I want to make it automatic so that you can just pass in the name of the package, and it will unload all the relevant shared libraries. Typically, the name of the shared library is

Hello All, This is a resend of a patch I posted nearly two weeks ago. As of a few minutes ago, it hasn't been committed and thus the AIX package builds from CVS fail. (I know because I now have a cron job that tells me :-) Could someone please review and commit the attached patch and chmod a+x contrib/aix/*.sh, or let me know what needs to be changed? It makes the following changes

Starting html help in the current version of R has a very annoying side-effect. It indiscriminantly removes $HOME/.R, and replaces it with a virgin copy. I discovered that when all of a sudden I got complaints about my startup "library" not being found. Below is a modified version of the script that doesn't do this. It is not perfect yet (it shouldn't try to recreate links

...manually from ZIP > > files to Perhaps you could tell us why you do this? Where do you get `contributed zipfiles' that are actually `ZIPfiles', especially as CRAN has .zip files you could get instead? Or is the problem in the way you get them? > > have > > > > pkgnames <- sub("\\.zip$", "", pkgnames) > > > > replaced with > > > > pkgnames <- sub("\\.zip$", "", pkgnames, ignore.case = TRUE) > > > > because the contributed zipfiles are ZIPfiles. The routine did not > > work...

Dear All I am having problems to install the package COZIGAM. Despite I have the update version of R (3.0.2) when I try to load the package I cannot find it in the list of available packages. If I try to install it from a local zip file I do get this error message: Error in read.dcf(file.path(pkgname, "DESCRIPTION"), c("Package", "Type")) : cannot open the