Displaying 6 results from an estimated 6 matches for "pax8".
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2009 Jun 18
2
Any method to speed up this problem?
...Suppose I have a vector like this:
[1] "STAT1" "STAT1" "STAT1" "STAT1" "GAPDH" "GAPDH" "GAPDH" "ACTB"
"ACTB"
[10] "ACTB" "DDR1" "RFC2" "HSPA6" "PAX8" "GUCA1A" "UBE1L" "THRA"
"PTPN21"
[19] "CCL5" "CYP2E1" "STAT1" "THRA" "PAX8"
I would like to produce a vector such that it has the same length as the one
above but it tells me where the duplica...
2007 Jun 06
2
Multiple color schemes for barchart (lattice)
Hello R-help.
I am trying to make a stacked barplot where the color of the sections of
each bar depend on another variable.
> myData[1:11,]
score percent marker cellType Malignant
1 0 100.00000 ESR1 (ER) Bladder.M(5) TRUE
2 0 80.00000 PAX8 Bladder.M(5) TRUE
3 1 20.00000 PAX8 Bladder.M(5) TRUE
4 0 100.00000 ESR1 (ER) Brain.N(3) FALSE
5 0 100.00000 PAX8 Brain.N(3) FALSE
6 3 100.00000 ESR1 (ER) Breast.M(11) TRUE
7 0 100.00000 PAX8 Breast.M(11) TRUE
8 0 36.36364 ESR1 (ER) Cervix.M(11) TR...
2008 Jun 24
1
Binding result of a function to a data frame
...V2 V3 V4 V5
1 1007_s_at DDR1 2865.1 2901.3 1978.3
2 1053_at RFC2 103.6 81.6 108.0
3 117_at HSPA6 222.0 222.5 306.2
4 121_at PAX8 2146.3 2457.2 1901.9
5 1255_g_at GUCA1A 226.5 321.2 109.2
6 1294_at UBE1L 296.6 424.6 406.1
7 1316_at THRA 339.9 354.2 178.3
8 1320_at PTPN21 78.4...
2010 Apr 29
1
merged files
...7 1053_at:120:925,
1053_at:504:41,
1053_at:522:871,
1053_at:828:1025,
203696_s_at:291:651 73287845,
73287869,
73287863,
73287881,
73287850 73287821,
73287845,
73287839,
73287857,
73287826 A_23_P93823 73287861 73287802 RFC2 5982 11 7 HSPA6 3310
1 1 A_23_P114903 159762782 159762841 PAX8 7849 12 2 A_23_P210001
113691555 113691496 GUCA1A 2978 6 6 UBA7 7318 24 3
1294_at:1079:379,
1294_at:361:881,
203281_s_at:524:889,
203281_s_at:678:1017,
203281_s_at:68:1153 49818386,
49818398,
49818378,
49818434,
49818422 49818362,
49818374,
49818354,
49818420,
49818398
sorry for...
2008 May 30
1
A question about *read.table()*
...prSet <- read.table('70mel_GSA.txt', row.names = 1,header =FALSE)
> dim(exprSet)
[1] 22277 71
> exprSet[1:4,1:4]
V2 V3 V4 V5
GENE1 DDR1 10.215229 8.546666 9.207030
GENE2 RFC2 8.028489 8.175520 9.090902
GENE3 HSPA6 4.633769 4.822625 5.125172
GENE4 PAX8 6.121433 6.396281 6.000987
The two txt files are of similar format. The only difference so far I can
tell is that
the second file is of more rows and columns. Other than that, they are
basically
the same. But I don't know what is the issue with the first txt file.
Thank you so much for your...
2010 Apr 29
0
merge on criteria
...7 1053_at:120:925,
1053_at:504:41,
1053_at:522:871,
1053_at:828:1025,
203696_s_at:291:651 73287845,
73287869,
73287863,
73287881,
73287850 73287821,
73287845,
73287839,
73287857,
73287826 A_23_P93823 73287861 73287802 RFC2 5982 11 7 HSPA6 3310
1 1 A_23_P114903 159762782 159762841 PAX8 7849 12 2 A_23_P210001
113691555 113691496 GUCA1A 2978 6 6 UBA7 7318 24 3
1294_at:1079:379,
1294_at:361:881,
203281_s_at:524:889,
203281_s_at:678:1017,
203281_s_at:68:1153 49818386,
49818398,
49818378,
49818434,
49818422 49818362,
49818374,
49818354,
49818420,
49818398
sorry for...