search for: packagestartupmessag

...e: <other pkg> in some cases, e.g. > library("R.utils", quietly=TRUE) Loading required package: R.methodsS3 [...] I traced this to base:::.getRequiredPackages2(), which forgets to pass 'quietly' to an internal library() call: if (!attached) { if (!quietly) packageStartupMessage(gettextf("Loading required package: %s", pkg), domain = NA) library(pkg, character.only = TRUE, logical.return = TRUE, lib.loc = lib.loc) || stop(gettextf("package %s could not be loaded", sQuote(pkg)), call. = FALSE, domain = NA) } It's from...

...me, pkgname) { ## package startup check toinstall=c( "graph", "Rgraphviz", "RBGL" ) already_installed <- sapply(toinstall, function(pkg) requireNamespace(pkg, quietly=TRUE)) if (any(!already_installed)){ packageStartupMessage("Need to install the following package(s): ", toString(toinstall[!already_installed]), "\n") } ## install if needed if(!base::all(already_installed)){ if (!requireNamespace("BiocManager", quietly=TRUE)) in...

I'm currently working on a new package for R that interfaces with an API. Most of the package's functionality requires users to supply an access key that allows the package to work with the API. I want to display text immediately upon loading the package that instructs/reminds users to enter their access key before attempting to do anything (as the package won't really work without

...g default condition handlers. This would allow > the condition to be re-signaled with a custom class and then having > a custom conditionMessage method is less likely to cause conflicts. Is it correct that you are proposing something that allows us to do: registerDefaultConditionHandlers( packageStartupMessage = function(c) { ## Do something with condition 'c' ... ## Suppress futher processing invokeRestart("muffleMessage") } ) at the core, which avoids having us to wrap up calls in withCallingHandlers() at top-level calls, e.g. > withCallingHandlers({ library(...

Hi Luke, Thank you for your response. On 6/21/19 10:56 AM, Tierney, Luke wrote: Thanks for the suggestion. However I don't think it is the right way to go. I also don't care for what install.packages() does. Signaling a warning and then an error means someone has to catch both the error and the warning, or suppress the warning, in order to handle the error programmatically. I do care

...package, c(which.lib.loc, lib.loc)) dataPath <- file.path(which.lib.loc, package, "data") env <- attachNamespace(ns, pos = pos, dataPath = dataPath, deps)}) 17: library(pkg_name, lib.loc = lib, character.only = TRUE, logical.return = TRUE) 18: withCallingHandlers(expr, packageStartupMessage = function(c) invokeRestart("muffleMessage")) 19: suppressPackageStartupMessages(library(pkg_name, lib.loc = lib, character.only = TRUE, logical.return = TRUE)) 20: doTryCatch(return(expr), name, parentenv, handler) 21: tryCatchOne(expr, names, parentenv, handlers[[1L]]) 22: tryCatch...

...tructure(msg, class = "try-error", condition = e))}) 13: try({ ns <- loadNamespace(package, c(which.lib.loc, lib.loc)) env <- attachNamespace(ns, pos = pos, deps)}) 14: library(pkg_name, lib.loc = lib, character.only = TRUE, logical.return = TRUE) 15: withCallingHandlers(expr, packageStartupMessage = function(c) invokeRestart("muffleMessage")) 16: suppressPackageStartupMessages(library(pkg_name, lib.loc = lib, character.only = TRUE, logical.return = TRUE)) 17: doTryCatch(return(expr), name, parentenv, handler) 18: tryCatchOne(expr, names, parentenv, handlers[[1L]]) 19: tryCatch...

I want to load an in-house library 'differently' in a particular context and, to achieve this, would like to govern the behaviour of its .onLoad() function. In a related context, Frank Harrell and I have been wondering on and off about how to tell Hmisc to be less verbose in certain situations. He achieves this by placing information in a custom field in options(). I could do the same

...hich.lib.loc, lib.loc), keep.source = keep.source) dataPath <- file.path(which.lib.loc, package, "data") env <- attachNamespace(ns, pos = pos, dataPath = dataPath, deps)}) 9: library(pkg_name, lib.loc = lib, character.only = TRUE, logical.return = TRUE) 10: withCallingHandlers(expr, packageStartupMessage = function(c) invokeRestart("muffleMessage")) 11: suppressPackageStartupMessages(library(pkg_name, lib.loc = lib, character.only = TRUE, logical.return = TRUE)) 12: doTryCatch(return(expr), name, parentenv, handler) 13: tryCatchOne(expr, names, parentenv, handlers[[1L]]) 14: tryCatchList...

...package, c(which.lib.loc, lib.loc)) dataPath <- file.path(which.lib.loc, package, "data") env <- attachNamespace(ns, pos = pos, dataPath = dataPath, deps)}) 9: library(pkg_name, lib.loc = lib, character.only = TRUE, logical.return = TRUE) 10: withCallingHandlers(expr, packageStartupMessage = function(c) invokeRestart("muffleMessage")) 11: suppressPackageStartupMessages(library(pkg_name, lib.loc = lib, character.only = TRUE, logical.return = TRUE)) 12: doTryCatch(return(expr), name, parentenv, handler) 13: tryCatchOne(expr, names, parentenv, handlers[[1L]]) 14: tryCatch...

...try-error", condition = e))}) 12: try(sys.source(codeFile, env, keep.source = keep.source, keep.parse.data = keep.parse.data)) 13: loadNamespace(package = package, lib.loc = lib.loc, keep.source = keep.source, keep.parse.data = keep.parse.data, partial = TRUE) 14: withCallingHandlers(expr, packageStartupMessage = function(c) tryInvokeRestart("muffleMessage")) 15: suppressPackageStartupMessages(loadNamespace(package = package, lib.loc = lib.loc, keep.source = keep.source, keep.parse.data = keep.parse.data, partial = TRUE)) 16: code2LazyLoadDB(package, lib.loc = lib.loc, keep.source = kee...

...ctive() || stats::runif(1) > 0.1) return() tips <- c("Need help? Try the ggplot2 mailing list: http://groups.google.com/group/ggplot2.", "Find out what's changed in ggplot2 at http://github.com/tidyverse/ggplot2/releases.", "Use suppressPackageStartupMessages() to eliminate package startup messages.", "Stackoverflow is a great place to get help: http://stackoverflow.com/tags/ggplot2.", "Need help getting started? Try the cookbook for R: http://www.cookbook-r.com/Graphs/", "Want to understand how al...

...1) > return() > tips <- c("Need help? Try the ggplot2 mailing list: > http://groups.google.com/group/ggplot2.", > "Find out what's changed in ggplot2 at > http://github.com/tidyverse/ggplot2/releases.", > "Use suppressPackageStartupMessages() to eliminate package > startup messages.", > "Stackoverflow is a great place to get help: > http://stackoverflow.com/tags/ggplot2.", > "Need help getting started? Try the cookbook for R: > http://www.cookbook-r.com/Graphs/", >...

Hi Everyone: It turns out that there's still a small ( I hope ) problem. I'm close but that only counts in horse shoes and hand grenades. Here's my problem: When trying to load a package that I am writing, the load is looking for the packageDescription function in the utils package but not finding the utils package. I looked on cran and utils is not there which makes me think that it

...urn() >> tips <- c("Need help? Try the ggplot2 mailing list: >> http://groups.google.com/group/ggplot2.", >> "Find out what's changed in ggplot2 at >> http://github.com/tidyverse/ggplot2/releases.", >> "Use suppressPackageStartupMessages() to eliminate package >> startup messages.", >> "Stackoverflow is a great place to get help: >> http://stackoverflow.com/tags/ggplot2.", >> "Need help getting started? Try the cookbook for R: >> http://www.cookbook-r.com/Graphs/...

Dear Russ, I had the same problem in my vignettes and setting both message and warning to FALSE seems to remove all unwanted output: ```{r message=FALSE, warning=FALSE} library("afex") library("ggplot2") library("cowplot") theme_set(theme_grey()) ``` Result: https://cran.r-project.org/web/packages/afex/vignettes/afex_plot_introduction.html Best, Henrik Am Di.,

Whereas it is true that one has to contact GitHub to detach a GitHub repository, it really is no problem (or at least was no problem in 2016). I wanted to do so when I took over the maintainer role of LaplacesDemon which only remained on GitHub as a fork on some other person's private account. So I forked and then contacted GitHub support and simply asked them to remove the "forked

Thank you, everybody, who replied! I appreciate your valuable advise! I will move the location of the set.seed() command to after all packages have been installed and loaded. Best regards, Gary Sent from my iPad > On Mar 4, 2018, at 12:18 PM, Paul Gilbert <pgilbert902 at gmail.com> wrote: > > On Mon, Feb 26, 2018 at 3:25 PM, Gary Black <gwblack001 at sbcglobal.net> >

...%s:\n %s", sQuote(package), P, conditionMessage(e)) if (logical.return) message(paste("Error:", msg), domain = NA) else stop(msg, call. = FALSE, domain = NA)})* * 8: library(pkg_name, lib.loc = lib, character.only = TRUE, logical.return = TRUE)* * 9: withCallingHandlers(expr, packageStartupMessage = function(c) invokeRestart("muffleMessage"))* *10: suppressPackageStartupMessages(library(pkg_name, lib.loc = lib, character.only = TRUE, logical.return = TRUE))* *11: doTryCatch(return(expr), name, parentenv, handler)* *12: tryCatchOne(expr, names, parentenv, handlers[[1L]])* *13:...

...P, conditionMessage(e)) if (logical.return) > message(paste("Error:", msg), domain = NA) else stop(msg, call. = FALSE, > domain = NA)})* > > * 8: library(pkg_name, lib.loc = lib, character.only = TRUE, logical.return > = TRUE)* > > * 9: withCallingHandlers(expr, packageStartupMessage = function(c) > invokeRestart("muffleMessage"))* > > *10: suppressPackageStartupMessages(library(pkg_name, lib.loc = lib, > character.only = TRUE, logical.return = TRUE))* > > *11: doTryCatch(return(expr), name, parentenv, handler)* > > *12: tryCatchOne(expr, name...