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2019 Oct 10
2
How to refer to my package from another package DESCRIPTION
Hello, I am developing some packages. Package1 requires Package2, both of which I developed:
Right now Package2 is installed properly here:
/myHome/libraries/Package2
Package1 needs Package2. Package1 refers to Package2 both in the Roxygen @import field for one of the functions, and also in the Imports section in the DESCRIPTION
However, when I do ?R CMD c...
2014 Nov 26
3
Problem understanding behaviour of versionCheck for loadNamespace (and when versions for Imports packages are checked)
...ecifications given in the Imports field when a
namespace is loaded"
But some toy (locally built and loaded) examples seem to show that while the
Depends versions are checked, the Imports version constraints are not (on
Windows 64, running R3.1.2, see full session_info later).
My tests (package2 imports package1) use implicit loading (via the
package1::fun1() idiom) so I have worked back to try get a minimal example
of what's causing me problems. I have tried
loadNamespace('package2', versionCheck = list (op = ">=", version =
package_version('3.0')))...
2014 Nov 27
2
Problem understanding behaviour of versionCheck for loadNamespace (and when versions for Imports packages are checked)
...cific I should report or log the bug or will that
happen from this mailing-list automatically? (I have seen the Bug Tracking
link on the r-project page and followed that, but don't yet have a Bugzilla
account, nor know the precise mechanics and protocols for notifying a bug)
Geoff
PS Building package2 - via devtools::build('package2', binary = TRUE) does
check and insist that I have an appropriate version of the 'to be imported'
package1 installed in my .libPath().
It was only when I simulated a user who has and older version of the
Imported package1 (by overwriting the later ve...
2014 Nov 27
2
Problem understanding behaviour of versionCheck for loadNamespace (and when versions for Imports packages are checked)
...a third component to the list
(even a nonsense one).
What I haven't yet had the fortitude to do is track down through the code to
see what the arguments are (ie how many elements there are in the
versionCheck list) to any calls to loadNamespace that are generated
internally when the Imports to package2 are being loaded (either because
they are explicitly mentioned in the NAMESPACE file, or because they are
invoked by a "importedpackage1::fun_from_imported_package1" line of code).
I'll put a bug report together later today, and include my toy packages etc.
Once again thanks for loo...
2014 Nov 27
0
Problem understanding behaviour of versionCheck for loadNamespace (and when versions for Imports packages are checked)
...op=">",
version=package_version('3.0')))
Error in loadNamespace("rgl", versionCheck = list(name = "rgl", op =
">", :
namespace ?rgl? 0.95.1163 is being loaded, but > 3.0 is required
Duncan Murdoch
>
> Geoff
>
> PS Building package2 - via devtools::build('package2', binary = TRUE) does
> check and insist that I have an appropriate version of the 'to be imported'
> package1 installed in my .libPath().
>
> It was only when I simulated a user who has and older version of the
> Imported package1 (by...
2014 Nov 26
0
Problem understanding behaviour of versionCheck for loadNamespace (and when versions for Imports packages are checked)
...espace is loaded"
>
>
>
> But some toy (locally built and loaded) examples seem to show that while the
> Depends versions are checked, the Imports version constraints are not (on
> Windows 64, running R3.1.2, see full session_info later).
>
>
>
> My tests (package2 imports package1) use implicit loading (via the
> package1::fun1() idiom) so I have worked back to try get a minimal example
> of what's causing me problems. I have tried
According to what you have written, that should have failed. So it
looks like a bug.
>
>
>
> loadNam...
2014 Nov 27
0
Problem understanding behaviour of versionCheck for loadNamespace (and when versions for Imports packages are checked)
...> (even a nonsense one).
>
> What I haven't yet had the fortitude to do is track down through the code to
> see what the arguments are (ie how many elements there are in the
> versionCheck list) to any calls to loadNamespace that are generated
> internally when the Imports to package2 are being loaded (either because
> they are explicitly mentioned in the NAMESPACE file, or because they are
> invoked by a "importedpackage1::fun_from_imported_package1" line of code).
>
> I'll put a bug report together later today, and include my toy packages etc.
As me...
2014 Nov 27
1
Problem understanding behaviour of versionCheck for loadNamespace (and when versions for Imports packages are checked)
...t (even a nonsense one).
>
> What I haven't yet had the fortitude to do is track down through the
> code to see what the arguments are (ie how many elements there are in
> the versionCheck list) to any calls to loadNamespace that are
> generated internally when the Imports to package2 are being loaded
> (either because they are explicitly mentioned in the NAMESPACE file,
> or because they are invoked by a
"importedpackage1::fun_from_imported_package1" line of code).
>
> I'll put a bug report together later today, and include my toy packages
etc.
As...
2019 Oct 10
0
How to refer to my package from another package DESCRIPTION
On 10/10/2019 5:13 p.m., Ramiro Barrantes wrote:
> Hello, I am developing some packages. Package1 requires Package2, both of which I developed:
>
> Right now Package2 is installed properly here:
>
> /myHome/libraries/Package2
>
> Package1 needs Package2. Package1 refers to Package2 both in the Roxygen @import field for one of the functions, and also in the Imports section in the DESCRIPTIO...
2009 Sep 12
3
problem with a repo
...to install because a
dependency is missing. I added perl-Image-Info to rpmforge's excludepkgs
line and tried to install the package again this time thinking it would pull
from epel. This did not occur yum still tried to fetch from rpmforge. For my
excludepkgs line i tried:
excludepkgs=package1,package2,perl-Image-Info
and since the changes weren't picked up i did:
excludepkgs=package1 package2 perl-Image-Info
Any help appreciated.
Thanks.
Dave.
2007 Feb 19
22
Puppet''s yum provider does not support versions?
Why doesn''t the yum provider support version, I tried added ensure ->
''ver'' and it barfs up (on clients) with:
<snip>
err: //stan.gbuild.org/any-host/java/Package[j2sdk]/ensure:
change from 1.4.2_12-fcs to 1.4.2_13-fcs failed: Package provider yum
does not support specifying versions at /etc/puppet/manifests/classes/
java.pp:13
</snip>
2006 Apr 30
1
aditional repo's
i'm looking for aditional repo's to add to yum that:
1) have multimedia apps
2) don't break my centos base install
2007 Sep 09
2
package manager
How do I force the package manager to re-install a package?
Such as Development - > Development Tools -> G77
Or the entire Development tools package?
The G77 Is missing - and when I ask it to install - it states that is
already installed.
Thanks
Dan A. Dansereau
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2007 Mar 02
2
Build a special RPM
Hi,
I want to build a single RPM that has more than one software in it and a
different name from them.
Let's imagine for the sake of example that i want to make an RPM called
databases.rpm that installs both MySQL and Postgres.
How can i do this with a single spec file ?
I've googled for an hour or two and found no info about this issue.
Can someone enlighten me, please ?
2012 Jun 21
1
package slot of generic "[" and missing env@target?
...e upgraded to R 2.15, I have a problem with duplicate S4 class name no longer works (the reason for having duplicate S4 class names is just software forks - they are largely identical but don't have an inheritence relationship, and will never have such).
This is happening with "library(mypackage2)" :
Error: package slot missing from signature for generic ?[?
and classes myclass, ANY, ANY, ANY
cannot use with duplicate class names (the package may need to be re-installed)
I have done "debug(methods:::.pkgMethodLabel)" and found that curiously, it is invoked for the two copie...
2010 May 30
4
Changing R_LIB_USER variable in ubuntu...
Hi,
I'm an experienced R user on windows, but new to linux. This may be an
issue with how R (or Ubuntu) was install on my computer, but maybe not.
I just installed Ubuntu 10.04, I have administrator privileges and
am using R 2.11. Here goes:
I'd like to change the location where R installs packages not included
in the base installation (using install.packages()). Right now it is
2011 Aug 18
10
Circular RPM dependencies...
Hi.
I encountered a following problem, if I state for example:
package{"aspell-en": ensure => absent, }
package{"aspell": ensure => absent, }
I get error in logs because of dependencies. It seems that puppet uses
''yum'' for installation on CentOS and ''rpm -e'' for removal of packages,
so it cannot handle this kind of dependencies:
2011 May 19
5
identical function names from 2 packages
Hi,
If I load 2 packages that have a function with the same
name, how do I tell R to run one or the other?
(Instead of having R automatically use the first- or
last-loaded one, whichever it is. (Which is it, by the way.))
Cheers!
Nick
--
====================================================
Nicholas J. Matzke
Ph.D. Candidate, Graduate Student Researcher
Huelsenbeck Lab
Center for
2011 Jun 14
5
puppet dashboard
I am using Ubuntu 10.04 and ruby-enterprise (not ubuntu ruby) and installed puppet via gem.
How can I install puppet-dashboard if I don''t see a gem available and if I use the ubuntu package, i get the whole slop of ruby packages sucked in (which i am trying to avoid)?
# dpkg -i puppet-dashboard_1.1.0-1_all.deb
Selecting previously deselected package puppet-dashboard.
(Reading database