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When I try to load "fBasics" package, I get following error/warning : > library(fBasics) Loading required package: fImport Loading required package: fSeries Loading required package: fBasics Loading required package: fImport Loading required package: fSeries Loading required package: fBasics Loading required package: fImport Loadi...

Hi, I recently updated to R 3.0.1. I'm running linux ubuntu 12.04. I realized that I have to update all the installed packages so I run > update.packages(checkBuilt=TRUE) as described here http://www.r-bloggers.com/r-3-0-0-is-released-whats-new-and-how-to-upgrade/ . The first thing it did was telling me that it will not update several packages. When it was finished I used the warnings function to have a look at wh...

...eset. So I guess the yum update didn't complete and I now get this when I run 'yum update': ======================= Setting up Update Process Setting up repositories Reading repository metadata in from local files Resolving Dependencies --> Populating transaction set with selected packages. Please wait. ---> Package system-config-printer-gui.i386 0:0.6.116.10-1.2 set to be updated ---> Package system-config-packages.noarch 0:1.2.23-2 set to be updated ---> Package cvs.i386 0:1.11.17-9.RHEL4 set to be updated ---> Package kernel-hugemem-devel.i686 0:2.6.9-67.0.4.EL set t...

...ng, reading in metadata epel : ################################################## 4047/4047 primary.xml.gz 100% |=========================| 137 kB 00:01 sqlite cache needs updating, reading in metadata update : ################################################## 451/451 Parsing package install arguments Resolving Dependencies --> Populating transaction set with selected packages. Please wait. ---> Package wine.i386 0:1.0.1-1.el5 set to be updated --> Running transaction check --> Processing Dependency: wine-jack = 1.0.1-1.el5 for package: wine --> Processing Depend...

Hey folks, With all the troubles I''ve been having with the version of xen that comes with RHEL 5.8 I was wondering whether there is somewhere out there where I can grab more recent versions in RPM format. I pulled down the sources from xen.org but would prefer to avoid having to build it myself if possible. RPMs are much cleaner. Is there some place out there to get something newer

Hi, This is (presumably?) a bug in R 1.7.0 under Windows. I have not tested it on other systems. Attachment of packages is case sensitive but not library(), resulting in multiple loadings of the same package if the library name is spelled differently. The following example loads the `tools' package, once as `tools' and once as `Tools'. This behavior is the same with all packages and it occurs also in R...

Dear All, When one loads certain packages, some other dependent packages are loaded as well. Is there some way of detaching them automatically when one detaches the first package loaded? For instance, > library(sqldf) Loading required package: RSQLite Loading required package: DBI Loading required package: gsubfn Loading required pack...

Hi Folks, I''ve got a 3.9 Tb zpool, and it is casing kernel panics on my Solaris 10 280r (SPARC) server. The message I get on panic is this: panic[cpu1]/thread=2a100a95cc0: zfs: freeing free segment (offset=423713792 size=1024) This seems to come about when the zpool is being used or being scrubbed - about twice a day at the moment. After the reboot, the scrub seems to have

...ion.string = R version 2.10.1 (2009-12-14) Locale: LC_CTYPE=de_CH.UTF-8;LC_NUMERIC=C;LC_TIME=en_US.UTF-8;LC_COLLATE=de_CH.UTF-8;LC_MONETARY=C;LC_MESSAGES=de_CH.UTF-8;LC_PAPER=de_CH.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=de_CH.UTF-8;LC_IDENTIFICATION=C Search Path: .GlobalEnv, package:skewt, package:rgl, package:ggplot2, package:reshape, package:plyr, package:proto, package:VGAM, package:stats4, package:splines, package:latticeExtra, package:RColorBrewer, package:doMC, package:multicore, package:foreach, package:codetools, package:iterators, package:abind, package:seqinr, packag...

...lems updating from 7.3 to 7.4 on my ppc64 (IBM Power7 p770) installation. yum update stops with Error: Multilib version problems found. [..] Protected multilib versions: systemd-libs-219-42.el7.ppc != systemd-libs-219-42.el7_4.1.ppc64 When I scroll back through the transaction check I see various package dependencies for *.ppc instead of *.ppc64. First appearance in the check is glibc.ppc and then everything goes nuts: [..] --> Running transaction check ---> Package boost-date-time.ppc64 0:1.53.0-27.el7 will be installed ---> Package elfutils-default-yama-scope.noarch 0:0.168-8.el7 will be...

Hi Heidi, Now We tried to install the puppet and puppet-server packages from puppetlabs, but we faced below discrepancy. Please look into this and let us know your suggestions because issue was not found in Puppet community as well. There was 1 issue related to this but it dint help us (http://projects.puppetlabs.com/issues/16634 ) We went through http:...

Hi all, I'm trying to understand how the search path and namespaces interact. For example, take the devtools package which suggests the testthat package. Here's what the search path looks like after I load each of those packages: > library(devtools) > search() [1] ".GlobalEnv" "package:devtools" "package:stats" [4] "package:graphics" "package:grD...

...100% |=========================| 1.1 kB 00:00 base 100% |=========================| 1.1 kB 00:00 addons 100% |=========================| 951 B 00:00 Setting up repositories Reading repository metadata in from local files Excluding Packages in global exclude list Finished Passing package list to Install Process Parsing package install arguments Resolving Dependencies --> Populating transaction set with selected packages. Please wait. ---> Package libdbi-dbd-mysql.i386 0:0.6.5-10.RHEL4.1 set to be updated ---> Package MyODBC....

Is anyone running tomcat5 from jpackage 1.6 on cento4 w/ java-1.4.2- sun-1.4.2.08-1jpp ? I'm getting weird dependencies which don't make sense, notably: Error: Missing Dependency: jdk = 2000:1.5.0_02-fcs is needed by package java-1.5.0-sun-compat I want to use 1.4.2 not 1.5 and it doesn't make sense to have jdk = 2000:1.5....

...am trying to install R on RHEL 5.4 while install R i am getting the dependency errors .. can you please help on this . [root at Rgraph ~]# yum install R Loaded plugins: rhnplugin, security This system is not registered with RHN. RHN support will be disabled. Setting up Install Process Parsing package install arguments Resolving Dependencies --> Running transaction check ---> Package R.x86_64 0:2.15.2-1.el5 set to be updated --> Processing Dependency: libRmath-devel = 2.15.2-1.el5 for package: R --> Processing Dependency: R-devel = 2.15.2-1.el5 for package: R --> Running transacti...

...| 23 MB 00:54 Examining /var/tmp/yum-root-3gwXzS/R-core-2.10.0-2.el4.i386.rpm: R-core-2.10.0-2.el4.i386 Marking /var/tmp/yum-root-3gwXzS/R-core-2.10.0-2.el4.i386.rpm to be installed Resolving Dependencies --> Running transaction check ---> Package R-core.i386 0:2.10.0-2.el4 set to be updated --> Processing Dependency: firefox for package: R-core-2.10.0-2.el4.i386 --> Processing Dependency: ggv for package: R-core-2.10.0-2.el4.i386 --> Processing Dependency: libg2c.so.0 for package: R-core-2.10.0-2.el4.i386 --> Processing Dependen...

...the salient points of the failing yum process:- <transcript> 2.6.18-53.1.21.el5xen[root at www ~]# yum -y upgrade Loading "installonlyn" plugin Loading "priorities" plugin Setting up Upgrade Process Setting up repositories Reading repository metadata in from local files 0 packages excluded due to repository priority protections Resolving Dependencies --> Populating transaction set with selected packages. Please wait. ---> Package frysk.i686 0:0.0.1.2008.03.19.rh1-1.el5 set to be updated ... <big snip> ... yum-fastestmirror noarch 1.1.10-9.el5.centos...

...stallation. >> yum update stops with >> Error: Multilib version problems found. >> [..] >> Protected multilib versions: systemd-libs-219-42.el7.ppc != >> systemd-libs-219-42.el7_4.1.ppc64 >> >> When I scroll back through the transaction check I see various package >> dependencies for *.ppc instead of *.ppc64. >> First appearance in the check is glibc.ppc and then everything goes nuts: >> [..] >> --> Running transaction check >> ---> Package boost-date-time.ppc64 0:1.53.0-27.el7 will be installed >> ---> Package el...

Hi, I cannot seem to get lme4 to work. I have installed the lme4 and Matrix package with apt-get. and both can be found in /usr/lib/R/site-library. When I tried an example for lmer, R could not find the function lmer(), > library(lme4) Attaching package: 'lme4' The following object(s) are masked from package:nlme : getCovariateFormula getResponseF...

Hello! I use Debian GNU/Linux at work and I really like apt-get tool. As far as I understand the whole picture, there are now some Debian packages of R packages. Build of Debian packages is done automagically by Perl script. By the way, what is the status of Debianizing R packages? Is it stopped, just holded, ... I don't know so I am asking There is also Bioconductor and I am aware that the list of packages is growing quite fast and a...