search for: mutants

Hello, Apologies if this is the wrong list, I am a first-time poster here. I have an experiment in which an output is measured in response to 42 different categories. I am only interested which of the categories is significantly different from a reference category. Here is the summary of the results: summary(simple.fit) Call: lm(formula = as.numeric(as.vector(TNFa)) ~ Mutant.ID, data =

...e approach suggests introducing a slight change into the code under a test (so called mutant). Then, if the test fails, mutant is considered as killed. Otherwise we say that mutant has survived. Along with that Mutation Testing introduces a metric, called Mutation Score: mutation score = (killed mutants) / (total mutants) The higher the mutation score - the more adequate the test suite is. Hence, the more mutants are killed, the better. Consider the following code: void test() { assert(sum(4, 5) > 0); } int sum(int a, int b) { return a + b; } Here, one can produce few mutants: int su...

Hello all, Sorry if this is an FAQ. I have been trying to search the archives without success. I have a dataset (ChiPs microarray) where the experiment to experiment variability is very high but where within an experiment, the data nearly always goes in the "right" (hypothesis confirming) direction. I am trying to figure out the right way to use R to do the statistics and generate

Hello all, Sorry if this is an FAQ. I have been trying to search the archives without success. I have a dataset (ChiPs microarray) where the experiment to experiment variability is very high but where within an experiment, the data nearly always goes in the "right" (hypothesis confirming) direction. I am trying to figure out the right way to use R to do the statistical analysis and

Hello All, Started out awhile ago trying to select columns in a dataframe whose names contain some variation of the word "mutant" using code like: names(KRASyn)[grep("muta", names(KRASyn))] The idea then would be to add together the various columns using code like: KRASyn$Mutant_comb <- rowSums(KRASyn[grep("muta", names(KRASyn))]) What I discovered though, is

Version of R: Windows Version 2.0.0 The experimental design contains two plant lines - a control (C) and a mutant (M) - grown out three separate times in plots A, B, C. The design is unbalanced: In plot A, 9 control plants were grown with 29 mutant plants. In plot B, 8 control plants were grown with 20 mutant plants. In plot C, 8 control plants were grown with 22 mutant plants. The

Hi, I have a data set like this: Mutant Rep Time OD 02H02 1 0 0.029 02H02 2 0 0.029 02H02 3 0 0.023 02H02 1 8 0.655 02H02 2 8 0.615 02H02 3 8 0.557 02H02 1 12 1.776 02H02 2 12 1.859 02H02 3 12 1.668 02H02 1 16 3.379 02H02 2 16 3.726 02H02 3 16 3.367 306 1 0 0.033 306 2

Hey Paul, Thanks for the reply! If you wanted you could try my radio stream, http://stream.socorock.com:8000/socorock.ogg.m3u - that's really good news, I think I'm gonna pick up one of these things soon! What a great way to listen to radio. Cheers, Jordan On 02/26/2012 12:01 AM, Paul Webster wrote: > The Grace and Logitech devices can play streaming OGG. I have different models of

Hello Everyone, I have what I think is a complex text parsing task. I've provided some sample data below. There's a relatively simple version of the coding that needs to be done and a more complex version. If someone could help me out with either version, I'd greatly appreciate it. Here are my sample data. haveData <- structure(list(profile_key = structure(c(1L, 1L, 2L, 2L, 2L,

Hello All, This will probably be easy for some but isn't for me. Currently am working on a text mining exercise. Want to be able to predict whether cancer patients got KRAS testing, and, if so, whether the test yielded a result of wild type/negative or mutant/positive. I've begun with a "bag-of-words approach" that looks at the count of specific terms in the medical records and

Hi all, I'm working on microarray and currently analyzing the microrarray data using limmaGUI. Loop design has been applied in this experiment. This is a 2X2 factorial experiment where there are control and treatment at 2 different time points, week 6 and 9. The experimental design is almost the same as the limmaGUI work example: Weaver Data set. I would like to look at the effect of

Hello, In limmaGUI, after running a linear model for a single gene & time point (mutant vs control), the venn-diagram for differentially expressed genes with a p-value cut-off gives a different number than the top-table with the same cut-off (2600 vs. 791). I have seen the same thing happen before for multiple time points (when the venn-diagram is more relevant) Any ideas what is going on?

I knew it couldn''t possibly go right. First attempt at upgrading a 0.1.0 host trashed the networking config majorly. In defense of 0.1.1, I did have an odd networking config (since XCP had problems with the built in Broadcom ports, I pif-forgetted them and let Linux handle them. If it weren''t for the mutant network config, I bet 0.1.1 would have done ok. More seriously,

Hello, I have a large (919 X 919), hierarchically clustered heatmap that I would like to read the labels off of. I have tried saving the figure in pdf format and enlarging it until I can see the labels, but if I make the labels small enough to read (so that they don't overlap) using cexRow and cexCol, they do not appear in the pdf. The limit seems to be anything below cexRow or Col = 0.06.

TURISMO & EVENTOS Luiz Guilherme 3031-7374 e Marcio Sorriso 9887-9141 S?o Paulo -SP Em abril, M?rcio Sorriso e Luiz Guilherme promover?o uma inesquec?vel viagem ? cidade maravilhosa. Ser? mais uma oportunidade para voc? divertir-se conhecer ou rever lugares maravilhosos, fazer novos amigos e ? claro, dan?ar e dan?ar... Muito! Voc? n?o pode deixar de participar. Leia a

Hey guys, I want to send an email via ROR and I have put this code at the very end in the config/environment.rb file- ActionMailer::Base.delivery_method = :smtp ActionMailer::Base.perform_deliveries = true ActionMailer::Base.logger = nil ActionMailer::Base.raise_delivery_errors = true ActionMailer::Base.smtp_settings = { :address => "[my smtp server]", :port => 25, :domain

   hi   Games do not need to setup just unzip the file program Win RAR and then start the game immediately with multiple levels  If your pc does not support the SWF files you can download the Advance flash player 5 software from here  Advance flash player download Open it to run the game file**   games (4wheelmadness (2.2 Mb     A giant truck ride and use your skills in jumping

....rb:9: Finished in 0.00767 seconds 1 example, 1 failure ********************************************************************** *** Cow#moo loaded with 1 possible mutations ********************************************************************** 1 mutations remaining... No mutants survived. Cool! What''s going on? None of this is behaviour I expect. Ashley -- blog @ http://aviewfromafar.net/ linked-in @ http://www.linkedin.com/in/ashleymoran currently @ home

...17324 Lotus Notes Client 6.5.5 crashed 17731 Profesor Henry 5.0 doesn't run - a black screen appears 18572 TCP(iexplore.exe:23945): Application bug, race in MSG_PEEK. 18585 Evil Genius crashes with page fault in d3d9 18613 Hero Lab hangs with an invisible message box while loading Mutants & Masterminds RPG game 18632 gklayout.dll compiled from mingw fails to load (.dll from Firefox) 18997 Warcraft 3 1.23 crashes after remaining one minute in a Battle.net chat room. 19627 IPersistFile_fnGetCurFile too stubby, some installers fail 19798 IoReportResourceUsage is not imp...

>From a development standpoint, what are the features that make Ruby on Rails a better choice compared to CakePHP? -- Posted via http://www.ruby-forum.com/.