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Hi, I am trying to calculate a distance matrix on a binary data frame using dist.binary() {ade4}. This is the code I run and the error I get: > sjlc.dist <- dist.binary(as.data.frame(data), method=2) #D = (a+d) / (a+b+c+d) Error in if (any(df < 0)) stop("non negative value expected in df") : missing value where TRUE/FALSE needed I don't know if the problem are the

Hi, I have the following function that I want to apply to a list of 14 matrices (1536 x 170) of binary data: DRes <- function(x, nr = 10000, metric = "mixed", ...) { require(analogue) require(ade4) m <- c() for (i in 1:nr) { set.seed(i) x1 <- x[, sample(dimnames(x)[[2]], length(x[1,])/2)] x2 <- x[, !dimnames(x)[[2]] %in% dimnames(x1)[[2]]] d1 <-

Hello, I would like to retrieve data stored in MySQL database, so I installed RMySQL package. I can successfully connect with the my database using the following code > dvr<-dbDriver("MySQL") > con2<-dbConnect(dvr,group="exbardiv") > mysqlDescribeConnection(con2) <MySQLConnection:(972,0)> User: mmorag Host: localhost Dbname: exbardiv

Hi, I have a TDM400P running with only one FXO port running on a VIA EPIA MS10000 (1Ghz Via Eden). When I run zttest from Zaptel 1.2.1 it hang and when I interrupt it with Ctrl-C that is the result: ?anyone have some idea about why isn't working? Some additional info: # /usr/src/zaptel/zttest -v Opened pseudo zap interface, measuring accuracy... --- Results after 0 passes --- Best:

Hi, I am trying to calculate a distance matrix on a binary data frame using dist.binary() {ade4}. This is the code I run and the error I get: > sjlc.dist <- dist.binary(as.data.frame(data), method=2) #D = (a+d) / (a+b+c+d) Error in if (any(df < 0)) stop("non negative value expected in df") : missing value where TRUE/FALSE needed I don't know if the problem are the

Hi useRs, I am trying to compare several distance matrices obtained from subsets of variables from the same experiment. I put all the subsets in a list and then calculated the distance matrices with lapply. In order to do a mantel test between them I wrote a function the returns a list with the output of single tests. I would like to include the name of the tests, so I know what each element

Dear useRs, I am working on a series of field experiments (159 in total) carried out in different years in several locations. The cultivars in each experiment are not always the same, in fact they change over time. I would like to get the fitted values and MSE of the individual fits from the following lmList object, so I can use them to fit a mixed model using the fitted values and weight each