search for: methylumi

...jectHits?, ?t? when loading ?bumphunter? Error: package or namespace load failed for ?methyAnalysis?: objects ?.__T__split:base?, ?split? are not exported by 'namespace:IRanges' In addition: Warning message: replacing previous import ?BiocGenerics::image? by ?graphics::image? when loading ?methylumi? I also try to install the package after downloading the source package from Bioconductor but the method is useless. Please help me to install the package named "methyAnalysis". Thanking you regards Pijush [[alternative HTML version deleted]]

...: package or namespace load failed for ?methyAnalysis?: >> objects ?.__T__split:base?, ?split? are not exported by >> 'namespace:IRanges' >> In addition: Warning message: >> replacing previous import ?BiocGenerics::image? by ?graphics::image? when >> loading ?methylumi? >> >> I also try to install the package after downloading the source package >> from >> Bioconductor but the method is useless. >> >> Please help me to install the package named "methyAnalysis". >> >> Thanking you >> >> >>...

...g ?bumphunter? > Error: package or namespace load failed for ?methyAnalysis?: > objects ?.__T__split:base?, ?split? are not exported by 'namespace:IRanges' > In addition: Warning message: > replacing previous import ?BiocGenerics::image? by ?graphics::image? when > loading ?methylumi? > > I also try to install the package after downloading the source package from > Bioconductor but the method is useless. > > Please help me to install the package named "methyAnalysis". > > Thanking you > > > > regards > Pijush > > [[alt...

Dear Bioc and R List Users, I am having trouble analysing illumine data generated from BeadScan. I have .idat files and JPEG images. I realise that i need bead-level summary data to be able to begin quality control followed by normalization. Is there a way i can read .idat files for expression analysis or do i need to go back to BeadScan and generate .txt files/tiff files ? Appreciate any help

...", repos = a["BioCsoft", "URL"]) : 'lib = "C:/Program Files/R/R-3.0.0/library"' is not writable Error in install.packages("BiocInstaller", repos = a["BioCsoft", "URL"]) : unable to install packages > biocLite("methylumi") I normally use mac computers, but I cannot get the right path for the folders I should use, so now I am trying with a windows platform instead. But now I cannot install one of the packages my pipeline needs. Can anyone help? I know it is probably a simple problem, but I have never used R...