search for: marker

...mixer:ALSA_MixerInit No master control found on CA0106, disabling mixer CellID: CSDS returned 169 servers. CellID: Connecting to 118.107.172.46:27031. . . CellID: Connect to 118.107.172.46:27031 took 167 MS CellID: Nothing beat our old best time of 9 MS Corrupt JPEG data: 57 extraneous bytes before marker 0xdb Corrupt JPEG data: 57 extraneous bytes before marker 0xdb err:ole:CoGetClassObject class {77f10cf0-3db5-4966-b520-b7c54fd35ed6} not registered err:ole:CoGetClassObject no class object {77f10cf0-3db5-4966-b520-b7c54fd35ed6} could be created for context 0x1 fixme:wbemprox:wbem_locator_ConnectSer...

Hello I have two data frames, SNP4 and SNP1: > head(SNP4) Animal Marker Y 3213 194073197 P1001 0.021088 1295 194073197 P1002 0.021088 915 194073197 P1004 0.021088 2833 194073197 P1005 0.021088 1487 194073197 P1006 0.021088 1885 194073197 P1007 0.021088 > head(SNP1) Animal Marker x 3213 194073197 P1001 2 1295 194073197 P1002 1 915 19...

Dear R users,   I am new user for elastic net. I am trying to use elasticnet library. I have marker data with 359 markers and 168 samples, and response is metabolites. I am trying to do regression between a metabolite and markers.  But i am getting the following error:   > en<-enet(marker,as.numeric(vio),lambda=0.5,normalize=FALSE,intercept=TRUE) Error in one %*% x : requires numeric matrix...

Colleagues, R 2.9.0 on all platforms I have a dataset that contains three columns of interest: ID's, serial elapsed times, and a marker. Representative data: Subject Time Marker 1 100.5 0 1 101 0 1 102 1 1 103 0 1 105 0 For each subject, I would like to find the time associated with MARKER == 1, then replace Time with Time - (Time[Marker == 1]) The result for this subject would be: Subject Time Marker 1...

Dear R-Helpers, I am not very experienced in using lattice and I am still in the learning stage I have a data set which looks like this: (I have deleted a few lines in order to save space) Chromosome marker Marker.Name Distance 1 1 1 PeMm261 0.0000 2 1 2 Xtxp8 10.1013 .. 20 1 20 EbMi148 210.3099 21 1 21 Xtxp25 232.0118 22 2 1 EcMm152 0.0000 23 2 2 EeMp342 5.1474 ... 36 2 1...

...= 'xy' does not work because of the properties of the y-asxis (positive and negative values). I am sure that there is a way but I haven't found it. Any suggestions? Best regards an many thanks in advance Thorsten ---- begin code snippet ---- example <- data.frame(meth = c('Marker 1', 'Marker 2', 'Marker 1', 'Marker 2', 'Marker 1', 'Marker 2', 'Marker 1', 'Marker 2', 'Marker 1', 'Marker 2', 'Marker 1', 'Marker 2', 'Marker 1', 'Marker 2', 'Marker 1', 'Mark...

Hi! Your plugin is really great! Thanks. One more little question. Is it possible to add event listeners to the maps via your plugin? greetings /till -------------- next part -------------- An HTML attachment was scrubbed... URL: http://rubyforge.org/pipermail/ym4r-user/attachments/20061106/6b1c6f4f/attachment.html

...//Creatin a MapOptions object with tthe required properties var myOptions = { zoom: 3, center: latlng, mapTypeId: google.maps.MapTypeId.ROADMAP }; //Creating the map var map = new google.maps.Map(document.getElementById("mapilla"), myOptions); // add the marker itself var marker = new google.maps.Marker({ position: latlng, map: map, draggable: true }); } function add_marker(map, lat, lng) { var point = new google.maps.LatLng(parseFloat(lat),parseFloat(lng)); var myOptions = { zoom: 10, center: point, //mapTypeCon...

Hi, I am working on stacked bar plot and want to add marker(arrow) in stacked bar plot. DF=data.frame(names=c("tomato", "potato", "cabbage", "sukuma-wiki", "terere"), freq=c(7,4,5,8,20)) barplot(as.matrix(DF[,2]), col=heat.colors(length(DF[,2])), legend=DF[,1], xlim=c(0,9), width=2) http://r.789695.n4.n...

Dear R listers, I have a data file looks like the following: Testing marker: s_1 --------------------------------------------- Allele df(0) -LnLk(0) df(T) -LnLk(T) ChiSq p 3 7995 29320.30 7994 29311.85 16.90 4e-05 (2229/8000 probands) Testing marker: s_2 ---------------------------------------------...

Hi All, I''m looking for a good example of client-side marker clustering with Mapstraction. It would be especially valuable if it was easily reusable code, similar to MarkerClusterer for Google Maps: http://gmaps-utility-library.googlecode.com/svn/trunk/markerclusterer/1.0/docs/reference.html If no such thing exists for Mapstraction (and I haven''...

Dear list   I have 5 markers that can be used to detect an infection in combination. Could you please advise me how to use functions in ROCR/ other package to produce the ROC curve for a combination of markers?   I have used the following to get ROC statistics for each marker. pred <- prediction(y$marker1, y$infectn) perf...

I''d like to add an event listener for dragging markers, but it looks like YM4R GM (and Mapstraction) doesn''t support this. I need an init like: marker = new GMarker(... GEvent.addListener(marker, "dragend", function() { }) but the current setup makes "anonymous" markers - never creates variable that can be used to ac...

I have very large data sets given in a format similar to d below. Converting these to a data frame is a bottleneck in my application. My fastest version is given below, but it look clumsy to me. Any ideas? Dieter # ----------------------- len = 100000 d = replicate(len, list(pH = 3,marker = TRUE,position = "A"),FALSE) # Data are given as d # preallocate vectors pH =rep(0,len) marker =rep(0,len) position =rep(0,len) system.time( { for (i in 1:len) { d1 = d[[i]] #Assign to vectors pH[i] = d1[[1]]...

Hello I have the problem that I want to transform a dataframe as generated by diagnosis <- rep(diagnosis[1:3], 3) marker <- gl(3,3) values <- rnorm(9) dataframe <- cbind(diagnosis, marker, values) dataframe <- dataframe[c(1:5, 7:9), ] into a matrix where levels(diagnosis) is indicating the rows of the matrix, levels(marker) the columns and values are the actual content of the matrix. However, as can be...

I am trying to use the marker method addlistener(). A simplified version of what I''m trying to do: var map; var marker; map = new mxn.Mapstraction(''myMap'',''google''); map.setCenterAndZoom(new mxn.LatLonPoint(45.559242,-122.636467), 15);...

The existing lifetime start/end is not very well defined (by spec, or by code) in what it means, so you could have nested lifetime markers if you wanted. If you made the spec well-defined, they would be meaningful (for loops, etc). There are a number of open bugs/complaints about lifetime markers and the fact that the scope is not well defined (the spec says "This intrinsic indicates that before this point in the code, the va...

...ucting the XML tree is extremely slow. My code (see below) adds only about 100 nodes per second on an Intel i5 machine. There's clearly something wrong but I don't see what. Here's a sample of the XML document: <?xml version="1.0" encoding="utf-8"?> <MarkerSet xmlns="http://www.brainproducts.com/MarkerSet"> <SamplingRate>512.032770097286</SamplingRate> <SamplingInterval>1.953</SamplingInterval> <Markers> <Marker> <Type>Stimulus</Type> <Description>prr_156</Des...

Hello, I noticed that option --keep-foreign-metadata discards WAV cue markers. Here is how to reproduce the bug: 1) Create a 24-bit 96khz in SoundForge8, add 20 seconds of silence, and add two markers with "m" key shortcut 2) Save it, compress it with "flac --keep-foreign-metadata testmarkers.wav" 3) Decompress it with "flac -d testmarkers.flac&quot...

Hi R-ers, I am struggling with my x-axis in a association plot. What I would like is to place the labels of the x-axis between the tick markers and normally the labels are printed at the place where the tick marker is placed. I don???t want to move the tick marker (it gives the switch between one chromosome and the next) but I just want to put the chromosome number in between the two tick markers. This example from mhtplo...