Displaying 2 results from an estimated 2 matches for "lumihumanall".
2012 Mar 30
1
Help with the lumi R package
...t;- model.matrix(~ factor(sampleType))
colnames(design) <- c('100:0', '95:5-100:0')
fit <- lmFit(selDataMatrix, design)
fit <- eBayes(fit)
## Add gene symbols to gene properties
if (require(lumiHumanAll.db) & require(annotate)) {
geneSymbol <- getSYMBOL(probeList, 'lumiHumanAll.db')
geneName <- sapply(lookUp(probeList, 'lumiHumanAll.db',
'GENENAME'), function(x) x[1])
fit$genes <- data.frame(ID= probeList,
geneSym...
2012 Mar 30
0
Help with lumi package R code
...t;- model.matrix(~ factor(sampleType))
colnames(design) <- c('100:0', '95:5-100:0')
fit <- lmFit(selDataMatrix, design)
fit <- eBayes(fit)
## Add gene symbols to gene properties
if (require(lumiHumanAll.db) & require(annotate)) {
geneSymbol <- getSYMBOL(probeList, 'lumiHumanAll.db')
geneName <- sapply(lookUp(probeList, 'lumiHumanAll.db',
'GENENAME'), function(x) x[1])
fit$genes <- data.frame(ID= probeList,
geneSym...