search for: lfrtbegin

Hi I am having problems compiling R on a Solaris 10 opteron box we have on trial. checking for Fortran libraries of g77... -L/usr/ccs/lib -L/usr/lib - L/usr/local/lib -L/usr/local/lib/gcc-lib/i386-pc-solaris2.10/3.3.2 - L/usr/ccs/bin -L/usr/local/lib/gcc-lib/i386-pc- solaris2.10/3.3.2/../../.. -lfrtbegin -lg2c -lm -lgcc_s -lfrtbegin: - lg2c: checking how to get verbose linking output from gcc... -v checking for C libraries of gcc... -L/usr/ccs/lib -L/usr/lib - L/usr/local/lib -L/usr/local/lib/gcc-lib/i386-pc-solaris2.10/3.3.2 - L/usr/ccs/bin -L/usr/local/lib/gcc-lib/i386-pc- solaris2.10/3.3.2/../....

hello, I create a package which includes C code and Lapack. But when I run " R CMD check ". an error message, "/usr/bin/ld: cannot find -lfrtbegin " occurs. could you tell me what is the problem? the detailed message is as follows: [credsim@confsys ~/src]$ R CMD check var * checking for working latex ... OK * using log directory '/home/credsim/src/var.Rcheck' * checking for file 'var/DESCRIPTION' ... OK * checking if thi...

...vas.f -o avas.o g77 -fno-common -g -O2 -c rlsmo.f -o rlsmo.o gcc -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o acepack.so ace.o avas.o rlsmo.o -L/usr/local/lib -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2 -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2/../../.. -lfrtbegin -lg2c -lSystem -lcc_dynamic -framework R ld: warning -L: directory name (/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2) does not exist ld: warning -L: directory name (/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2/../../..) does not exist ld: can't locate file for: -lfrtbegin make:...

...c tprs.c -o tprs.o gcc -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o mgcv.so gcv.o magic.o mat.o matrix.o mgcv.o qp.o tprs.o -framework vecLib -L/usr/local/lib -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2 -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2/../../.. -lfrtbegin -lg2c -lSystem -lcc_dynamic -framework R ld: warning -L: directory name (/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2) does not exist ld: warning -L: directory name (/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2/../../..) does not exist ld: can't locate file for: -lfrtbegin make: **...

...month 06 day 16 language R using debian testing (latest Knoppix) I get an error when installing acepack: gcc -shared -o acepack.so ace.o avas.o rlsmo.o -L/usr/lib/gcc-lib/i386-linux/3.3 -L/usr/lib/gcc-lib/i386-linux/3.3/../../.. -lfrtbegin -lg2c-pic -lm -lgcc_s -L/usr/lib/R/bin -lR /usr/bin/ld: cannot find -lfrtbegin collect2: ld returned 1 exit status make: *** [acepack.so] Error 1 ERROR: compilation failed for package 'acepack' Thanks for any assistance anyone can give. --- Frank E Harrell Jr Professor and Cha...

hi, my attempt to install the package Hmisc v3.0-1 fails with the message: /usr/bin/ld: cannot find -lfrtbegin collect2: ld returned 1 exit status make: *** [Hmisc.so] Error 1 ERROR: compilation failed for package 'Hmisc' i'm at a loss here. any hints will be very much appreciated. i'm running: debian stable R version 2.0.1 gcc 2.95.4-14 g77 2.95.4-14 binutils 2.12.90.0.1-4 robert R...

...flat_namespace -undefined suppress -L/usr/local/lib -o > Hmisc.so cidxcn.o cidxcp.o hoeffd.o jacklins.o largrec.o ranksort.o > rcorr.o wclosest.o -L/usr/local/lib > -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2 > -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2/../../.. -lfrtbegin > -lg2c -lSystem -lcc_dynamic -framework R > ld: warning -L: directory name > (/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2) does not exist > ld: warning -L: directory name > (/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2/../../..) does not > exist > ld: can'...

...X "2.0" directory - there is no separate directory for 1.9 packages as best I can tell. I did also try building the source package, but that failed. I emailed the packager asking for help, but it can't hurt to ask here as well. The problem is that the package build can't find -lfrtbegin. On Mac OS X this comes from fink so it is installed in /sw. So I untarred the package and edited Makevars to tell the build to look at -L/sw/lib, but interestingly enough that only worked for one gcc line, and not the final linking stage. As you can see below, the final linking stage is also l...

...compiler... yes checking whether g77 accepts -g... yes checking how to get verbose linking output from g77... -v checking for Fortran 77 libraries... -L/usr/local/lib -L/usr/lib/gcc-lib/i586-mandrake-linux-gnu/3.2 -L/usr/lib/gcc-lib/i586-mandrake-linux-gnu/3.2/../../.. -lreadline -ldl -lncurses -lfrtbegin -lg2c -lm -lgcc_s checking for dummy main to link with Fortran 77 libraries... unknown configure: error: linking to Fortran libraries from C fails ERROR: configuration failed for package 'Matrix' # R CMD INSTALL akima_0.3-4.tar.gz * Installing *source* package 'akima' ... ** libs...

...brary/Frameworks/R.f ramework/Versions/1.9.0/Resources/bin/libRlapack.dylib -o libRlapack.dylib dlapa ck0.lo dlapack1.lo dlapack2.lo dlapack3.lo cmplx.lo -lf77blas -latlas -L/sw/lib -L/usr/local/lib -L/sw/lib/gcc/powerpc-apple-darwin7.2.0/3.4 -L/sw/lib/gcc/powe rpc-apple-darwin7.2.0/3.4/../../.. -lfrtbegin -lg2c -lSystem ld: common symbols not allowed with MH_DYLIB output format with the -multi_modul e option /sw/lib/libg2c.a(err.o) definition of common _f__cblank (size 4) /sw/lib/libg2c.a(fmt.o) definition of common _f__cnt (size 40)

...c sdiag.f -o sdiag.o g77 -mieee-fp -fPIC -g -O2 -c sstdiag.f -o sstdiag.o gcc -shared -o KernSmooth.so blkest.o cp.o dgedi.o dgefa.o dgesl.o linbin2D.o linbin.o locpoly.o rlbin.o sdiag.o sstdiag.o -lf77blas -latlas -L/usr/lib/gcc-lib/i486-linux/3.3.2 -L/usr/lib/gcc-lib/i486-linux/3.3.2/../../.. -lfrtbegin -lg2c-pic -lm -lgcc_s -L/usr/lib/R/bin -lR /usr/bin/ld: cannot find -lf77blas collect2: ld returned 1 exit status make: *** [KernSmooth.so] Error 1 ERROR: compilation failed for package 'KernSmooth' ** Removing '/usr/lib/R/library/KernSmooth' ** Restoring previous '/usr/lib/R/li...

...R INSTALL pspline * Installing *source* package 'pspline' ... ** libs gcc -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o pspline.so Pspline.o -L/usr/local/lib -L/usr/local/lib/gcc/powerpc- apple-darwin6.6/3.4 -L/usr/local/lib/gcc/powerpc-apple-darwin6.6/3.4/../../.. -lfrtbegin -lg2c -lSystem -lcc_dynamic ld: warning -L: directory name (/usr/local/lib/gcc/powerpc-apple-darwin6.6/3.4) does not exist ld: warning -L: directory name (/usr/local/lib/gcc/powerpc-apple-darwin6.6/3.4/../../..) does not exist ld: can't locate file for: -lfrtbegin make: *** [pspline.so]...

...C function, but getting the following error. It looks like there is a conflict between Rmath.h, which I use to generate random numbers, and R_ext/Boolean.h I would appreciate any help to fix this problem. gcc -ansi -g -o Gibbs gibbs.c subroutines.o rand.o vector.o -lm -lRmath -llapack -lblas -lfrtbegin -lg2c -lm -shared-libgcc In file included from /usr/include/R_ext/Utils.h:27, from gibbs.c:7: /usr/include/R_ext/Boolean.h:29: conflicting types for `FALSE' /usr/include/Rmath.h:175: previous declaration of `FALSE' /usr/include/R_ext/Boolean.h:29: conflicting types for `TR...

...ependencies... yes, using gcc -MM checking whether gcc supports -c -o FILE.lo... yes checking how to get verbose linking output from g77... -v checking for Fortran libraries of g77... -L/usr/local/lib -L/usr/lib/gcc-lib/i386-redhat-linux/3.3.3 -L/usr/lib/gcc-lib/i386-redhat-linux/3.3.3/../../.. -lfrtbegin -lg2c -lm -lgcc_s -lieee checking for dummy main to link with Fortran libraries... unknown configure: error: linking to Fortran libraries from C fails See `config.log' for more details. I think this is the relevant part of the log, but I heavn't copied the lengthy section on the variable...

...GS='-mcpu=v9 -m64': checking how to get verbose linking output from g77... -v checking for Fortran libraries of g77... -L/usr/ccs/lib -L/usr/lib -L/usr/local/lib -L/usr/local/lib/gcc-lib/sparc-sun-solaris2.9/3.3 -L/usr/ccs/bin -L/usr/local/lib/gcc-lib/sparc-sun-solaris2.9/3.3/../../.. -lfrtbegin -lg2c -lm -lgcc_s checking for dummy main to link with Fortran libraries... unknown configure: error: linking to Fortran libraries from C fails See `config.log' for more details. I take this to mean that configure is looking for dummy main functions or #DEFINES in the R code right? Has any...

...ntly I experience failures to compile source packages. Messages like * Installing *source* package 'dse1' ... ** libs g77 -mieee-fp -fPIC -g -O2 -c dsefor.f -o dsefor.o gcc -shared -o dse1.so dsefor.o -L/usr/lib/gcc-lib/i486-linux/3.3.3 -L/usr/lib/gcc-lib/i486-linux/3.3.3/../../.. -lfrtbegin -lg2c-pic -lm -lgcc_s -L/usr/lib/R/bin -lR /usr/bin/ld: no se puede encontrar -lg2c-pic clearly point to the non-existence of library g2c-pic. Problem is I cannot locate the .deb package containing such library. Could some Debian user point me to the right location? (I am using Debian "tes...

...package 'dse1' ... ** libs g77 -fno-common -g -O2 -c dsefor.f -o dsefor.o gcc -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o dse1.so dsefor.o -L/usr/local/lib -L/usr/local/lib/gcc/powerpc-apple-darwin6.6/3.4 -L/usr/local/lib/gcc/powerpc-apple-darwin6.6/3.4/../../.. -lfrtbegin -lg2c -lSystem -lcc_dynamic /usr/bin/ld: -undefined: unknown argument: -lbundle1.o make: *** [dse1.so] Error 1 ERROR: compilation failed for package 'dse1' ** Removing '/Users/el/Library/RAqua/library/dse1' Emilio A. Laca Agronomy and Range Science UC Davis One Shields Ave. D...

...bRlapack.so dlapack0.lo dlapack1.lo dlapack2.lo dlapack3.lo cmplx.lo -lf77blas -latlas -L/usr/lib64 -L/usr/lib/gcc-lib/x86_64-redhat-linux/3.2.3 -L/usr/lib/gcc-lib/x86_64-redhat-linux/3.2.3/../../../../lib64 -L/usr/lib/gcc-lib/x86_64-redhat-linux/3.2.3/../../.. -L/lib/../lib64 -L/usr/lib/../lib64 -lfrtbegin -lg2c -lm -lgcc_s /usr/bin/ld: /usr/local/lib/libf77blas.a(xerbla.o): relocation R_X86_64_32 can not be used when making a shared object; recompile with -fPIC /usr/local/lib/libf77blas.a: could not read symbols: Bad value collect2: ld returned 1 exit status and I'm stuck to some extent. Note t...

...; ... >>> ** libs >>> gcc -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o >>> pspline.so Pspline.o -L/usr/local/lib >>> -L/usr/local/lib/gcc/powerpc- apple-darwin6.6/3.4 >>> -L/usr/local/lib/gcc/powerpc-apple-darwin6.6/3.4/../../.. -lfrtbegin >>> -lg2c -lSystem -lcc_dynamic >>> ld: warning -L: directory name >>> (/usr/local/lib/gcc/powerpc-apple-darwin6.6/3.4) does not exist >>> ld: warning -L: directory name >>> (/usr/local/lib/gcc/powerpc-apple-darwin6.6/3.4/../../..) does not >&gt...

...checking how to get verbose linking output from g77... -v checking for Fortran libraries of g77... -L/usr/ccs/lib -L/usr/lib -L/usr/local/lib -L/opt/lang/gcc-g77-3.3.2/lib/gcc-lib/i386-pc-solaris2.8/3.3.2 -L/usr/ccs/bin -L/opt/lang/gcc-g77-3.3.2/lib/gcc-lib/i386-pc-solaris2.8/3.3.2/../../.. -lfrtbegin -lg2c -lm -lgcc_s checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, extra underscore checking whether g77 appends underscores to external names... yes checking whether mixed C/Fortran code can be run.....