search for: lcc_dynamic

....4 (Tiger) system, and it fails. The behaviour is as follows $ R CMD CHECK oce ,,, gcc-3.3 -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o oce.so geoddist.o ocecp.o rho.o spice.o strho.o theta.o tsrho.o - L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2 -lg2c -lSystem - lcc_dynamic -F/Library/Frameworks/R.framework/.. -framework R ld: can't locate file for: -lcc_dynamic make: *** [oce.so] Error 1 and the system is as follows: R 2.2.0 (2005-10-06) gcc version 4.0.1 (Apple Computer, Inc. build 5247) and the g77 is from the R-2.2 DMG. I am getting the error on two mach...

...cc-3.3 -bundle -flat_namespace -undefined suppress -L/usr/local/lib - o tseries.so arma.o bdstest.o boot.o dsumsl.o garch.o ppsum.o tsutils.o -framework vecLib -L/usr/local/lib/gcc/powerpc-apple- darwin6.8/3.4.2 -lg2c -lSystem -L/usr/local/lib/gcc/powerpc-apple- darwin6.8/3.4.2 -lg2c -lSystem -lcc_dynamic -F/Library/Frameworks/ R.framework/.. -framework R ld: can't locate file for: -lcc_dynamic make: *** [tseries.so] Error 1 ERROR: compilation failed for package 'tseries' ** Removing '/Library/Frameworks/R.framework/Versions/2.2/Resources/ library/tseries' the -lcc_dynamic is...

we are trying to adapt the configure in order to work with latest gcc3.3 (from apple) and g77 3.4 (from http://gravity.psu.edu/~khanna/hpc.html ) At the moment there is no need to define the __DEBUGGING__ but there is still a problem with the -lcc_dynamic does any of you know how to check for this library and explain why we see -lcc_dynamic often passed as an ld flag. Where to find doc on this? stefano

Around line 527 of configure.ac in R-2.1.1 appears the following: darwin*) ## MacOS 10.3 and 10.4 do AM_CONDITIONAL(BUILD_DLFCN_DARWIN, false) ## SI says we want '-lcc_dynamic' on Darwin, although currently ## http://developer.apple.com /documentation/MacOSX/ has nothing ## official. AC_CHECK_LIB(cc_dynamic, main) ;; *) AM_CONDITIONAL(BUILD_DLFCN_DARWIN, false) AC_CHECK_LIB(dl, dlopen) ;; The purpose of this is to add -lcc_dynam...

...w/Library/Frameworks/R.framework/Resources/ include -I/Users/zpzhang/research/library/include -I/Users/zpzhang/research/ library/include -I/sw/include -fno-common -g -O2 -c RNetCDF.c -o RNetCDF.o gcc: unrecognized option '-no-cpp-precomp' gcc -bundle -flat_namespace -undefined suppress -lcc_dynamic -L/sw/lib -o RNetCDF.so RNetCDF.o -L/Users/zpzhang/research/library/lib -lnetcdf -L/ Users/zpzhang/research/library/lib -ludunits -lcc_dynamic -F/sw/Library/ Frameworks -framework R gcc: couldn't run 'undle-gcc-4.0.2': No such file or directory make: *** [RNetCDF.so] Error 1 ERROR: co...

...e -flat_namespace -undefined suppress -L/usr/local/lib -o mgcv.so gcv.o magic.o mat.o matrix.o mgcv.o qp.o tprs.o -framework vecLib -L/usr/local/lib -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2 -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2/../../.. -lfrtbegin -lg2c -lSystem -lcc_dynamic -framework R ld: warning -L: directory name (/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2) does not exist ld: warning -L: directory name (/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2/../../..) does not exist ld: can't locate file for: -lfrtbegin make: *** [mgcv.so] Error 1 ERROR: comp...

Hey, when did I lose MASS? Anyway, I found the VR package but she's not compiling on OS X. Any tips? Yes, I have the developer tools and Fortran. Could someone send me a compiled package?

...ompile this code and post the binaries for mac os X so that I can just get back to work? Please? Or is there a surefire way to get the compilation process working again? Thanks in advance. -Zak ld: warning -L: directory name (/usr/local/lib) does not exist ld: can't locate file for: -lcc_dynamic make: *** [sigPathway.so] Error 1 ERROR: compilation failed for package 'sigPathway' ** Removing '/Library/Frameworks/R.framework/Versions/2.2/Resources/ library/sigPathway'

...-L/sw/lib -lxml -lz -lz -lxml Compiling produced the following error: gcc -bundle -flat_namespace -undefined suppress -L/sw/lib -L/usr/local/lib -o XML.so DocParse.o EventParse.o ExpatParse.o HTMLParse.o RSDTD.o RUtils.o Utils.o XMLEventParse.o XMLTree.o -L/sw/lib -lxml -lz -lz -lxml -lcc_dynamic ld: multiple definitions of symbol _xmlParserError Utils.o definition of _xmlParserError in section (__TEXT,__text) /sw/lib/libxml.dylib(error.lo) definition of _xmlParserError make: *** [XML.so] Error 1 ERROR: compilation failed for package 'XML' I saw that back in September there was a d...

...;; + *darwin*) AC_DEFINE(DARWIN) + BLDSHARED="true" + LDSHFLAGS="-dynamic" + PICFLAG="-fPIC" + SHLD="libtool" + LIBS="${LIBS} -lc -lcc_dynamic" + CFLAGS="-dynamic -fno-common ${CFLAGS}" + ;; *solaris*) AC_DEFINE(SUNOS5) BLDSHARED="true" LDSHFLAGS="-G" -- -- #!/usr/bin/perl -w use strict; $_[$_]=...

...his is with configure --enable-R-shlib --with-tcl-config=/Library/Frameworks/Tcl.framework/tclConfig.sh --with-tk-config=/Library/Frameworks/Tk.framework/tkConfig.sh --with-blas='-framework vecLib' --with-lapack --with-aqua and with in the environment FPICFLAGS=-fno-common LDFLAGS=-lcc_dynamic CPPFLAGS=-D__DEBUGGING__ TCLTK_LIBS=/Library/Frameworks/Tcl.framework/Versions/Current /Library/Frameworks/Tk.framework/Versions/Current TCLTK_CPPFLAGS=/Library/Frameworks/Tcl.framework/Versions/Current/ Headers /Library/Frameworks/Tk.framework/Versions/Current/Headers === Jan de Leeuw; Profes...

.... ** libs g77 -fno-common -g -O2 -c dsefor.f -o dsefor.o gcc -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o dse1.so dsefor.o -L/usr/local/lib -L/usr/local/lib/gcc/powerpc-apple-darwin6.6/3.4 -L/usr/local/lib/gcc/powerpc-apple-darwin6.6/3.4/../../.. -lfrtbegin -lg2c -lSystem -lcc_dynamic /usr/bin/ld: -undefined: unknown argument: -lbundle1.o make: *** [dse1.so] Error 1 ERROR: compilation failed for package 'dse1' ** Removing '/Users/el/Library/RAqua/library/dse1' Emilio A. Laca Agronomy and Range Science UC Davis One Shields Ave. Davis CA 95616 (530) 754-4083

I am having trouble getting RMySQL working with R. It did at one point, work with an older 1.x version of R, but now with R2.2.1, I am getting the following messages on my OS X 10.4.5 system: RS-DBI driver warning: (MySQL mismatch between compiled version 4.0.24 and runtime version 4.1.14) if I then try to run any further db commands such as dbConnect, R crashes with a bus error. When

...opportunity' (if you can call a dead hard drive > that) to rebuild my iBook from scratch and I thought I'd share my > 'building R with minimum changes' :-) > > Note: I use bash not tcsh, I don't remember if this syntax works > > FPICFLAGS=-fno-common LDFLAGS=-lcc_dynamic ./configure > --enable-R-shlib --with-aqua --without-x --with-blas='-framework > vecLib' --with-lapack > make CFLAGS+=-D__DEBUGGING__ > > This gets rid of the devQuartz.c building problems caused by > Debugging.h and gets configure to run. Everything else is according t...

...rr.f -o rcorr.o g77 -fno-common -g -O2 -c wclosest.f -o wclosest.o gcc-3.3 -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o Hmisc.so cidxcn.o cidxcp.o hoeffd.o jacklins.o largrec.o ranksort.o rcorr.o wclosest.o -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2 -lg2c -lSystem -lcc_dynamic -framework R ld: warning -L: directory name (/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2) does not exist ld: can't locate file for: -lg2c make: *** [Hmisc.so] Error 1 ERROR: compilation failed for package 'Hmisc' ** Removing '/Library/Frameworks/R.framework/Versions/2.1.0/Res...

...s -L/usr/local/lib -o > Hmisc.so cidxcn.o cidxcp.o hoeffd.o jacklins.o largrec.o ranksort.o > rcorr.o wclosest.o -L/usr/local/lib > -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2 > -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2/../../.. -lfrtbegin > -lg2c -lSystem -lcc_dynamic -framework R > ld: warning -L: directory name > (/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2) does not exist > ld: warning -L: directory name > (/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2/../../..) does not > exist > ld: can't locate file for: -lfrtbegin >...

...ommon -g -O2 -c rlsmo.f -o rlsmo.o gcc -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o acepack.so ace.o avas.o rlsmo.o -L/usr/local/lib -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2 -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2/../../.. -lfrtbegin -lg2c -lSystem -lcc_dynamic -framework R ld: warning -L: directory name (/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2) does not exist ld: warning -L: directory name (/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2/../../..) does not exist ld: can't locate file for: -lfrtbegin make: *** [acepack.so] Error 1 ERRO...

...-darwin7.5.0/3.4.2 \ -L/export/local/powerpc-macosx/bin/../lib/gcc/powerpc-apple-darwin7.5.0/3.4.2/../../.. \ -L/usr/local/lib/gcc/powerpc-apple-darwin7.5.0/3.4.2/../../.. -lfrtbegin \ -lg2c -lgcc_s -lSystem ../extra/zlib/libz.a ../extra/bzip2/libbz2.a \ ../extra/pcre/libpcre.a -lreadline -lcc_dynamic -lncurses -lm \ -lcc_dynamic \ gcc: Carbon: No such file or directory On the GNU/Linux MIPS system, there is as yet no working Fortran compiler, and f2c fails to build there, so R cannot be expected to run. On the IBM AIX system, I get this failure: gcc -Wl,-bM:SRE -Wl,-H512 -Wl,-T512 -Wl,-b...

...ine 1094 3) Chicken-and-egg problem: There is a chicken-and-egg problem if --enable-R-framework is used: gcc -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o R_X11.so dataentry.lo devX11.lo rotated.lo rbitmap.lo -lSM -lICE -L/usr/X11R6/lib -lX11 -framework R -lz -lreadline -lcc_dynamic -lncurses -lm ld: can't locate framework for: -framework R make[4]: *** [R_X11.so] Error 1 --enable-framework adds: LIBR="-framework R" [configure.ac@173] which is then used: src/modules/X11/Makefile.in@36: R_X11_la_LIBADD = $(ALL_X_LIBS) $(BITMAP_LIBS) $(LIBR) If you instal...

...S-DBI.o gcc -no-cpp-precomp -I/usr/local/lib/R/include -I/usr/local/mysql/include -I/sw/include -fno-common -g -O2 -c RS-MySQL.c -o RS-MySQL.o gcc -bundle -flat_namespace -undefined suppress -L/sw/lib -L/usr/local/lib -o RMySQL.so RS-DBI.o RS-MySQL.o -L/usr/local/mysql/lib -lmysqlclient -lz -lcc_dynamic -L/usr/local/lib/R/bin -lR [SNIP] SIDLAW02:library/RMySQL/libs] geoff% ls -ltr total 500 -rwxr-xr-x 1 root staff 254816 Jan 14 23:45 RMySQL.so -rwxr-xr-x 1 root staff 249856 Jan 14 23:46 libmySQL.dll -rw-r--r-- 1 root staff 155 Jan 14 23:46 libMySQL_4.0.16....