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1999 Apr 21
0
[MAILER-DAEMON@biostat.ku.dk: Returned mail: /home/sfe1/r-bugs/.forward: line 1: "|/home/sfe1/r-bugs/bin/new_message Rnew"... User r-bugs@biostat.ku.dk doesn't have a valid shell for mailing to programs] (PR#170)
--rwEMma7ioTxnRzrJ
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at the bottom is a bug report - however I have include the bounce
headers in case you want to fix the mailer too. This was the
result of an online bug submission via http://r-bugs.biostat.ku.dk/cgi-bin/R.
pete
--rwEMma7ioTxnRzrJ
Content-Type: message/rfc822
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Return-Path: <>
Received: from stephens.ittc.ukans.edu (stephens.ittc.ukans.edu [129.237.125.220])
by fury.ittc.ukans....
2013 Jan 28
1
The RPC server is unavailable on Samba 4 clients
...ldap_search_init_page(hld,CN=Sites,CN=Configuration,DC=gaara,DC=sandbo
x,DC=net,LDAP_SCOPE_SUBTREE,(objectClass=ntDSDsa),.......
The previous call succeeded....
The previous call succeeded
Iterating through the list of servers
Getting information for the server CN=NTDS
Settings,CN=SHUKA-KU,CN=Servers,CN
=Default-First-Site-Name,CN=Sites,CN=Configuration,DC=gaara,DC=kazekage,DC=net
objectGuid obtained
InvocationID obtained
dnsHostname obtained
site info obtained
All the info for the server collected
* Identifying all NC cross-refs.
Got error while checking if the...
2015 Dec 01
1
Package Dependency
...> alreadyHave <- desiredPackages %in% installedPackages
> install.packages(desiredPackages[!alreadyHave],
+ dependencies = c("Depends"),
+ lib = TARGETLIB)
trying URL 'http://rweb.crmda.ku.edu/cran/src/contrib/DiagrammeR_0.8.1.tar.gz'
Content type 'application/x-gzip' length 3438156 bytes (3.3 MB)
==================================================
downloaded 3.3 MB
trying URL 'http://rweb.crmda.ku.edu/cran/src/contrib/emplik_1.0-2.tar.gz'
Content type 'applic...
2015 Nov 23
3
MKL Acceleration encouraging; need adjust package builds?
Dear R-devel:
The Cluster administrators at KU got enthusiastic about testing
R-3.2.2 with Intel MKL when I asked for some BLAS integration. Below
I forward a performance report, which is encouraging, and thought you
would like to know the numbers. Appears to my untrained eye there are
some extraordinary speedups on Cholesky decomposition, de...
2008 Aug 06
1
bug submitting bug? [Fwd: Undelivered Mail Returned to Sender]
...age when I tried to submit a
bug from http://bugs.r-project.org/cgi-bin/R
(B) The bug report itself is at the bottom.
Thanks,
Chris
(A)
-------- Original Message --------
Subject: Undelivered Mail Returned to Sender
Date: Wed, 6 Aug 2008 17:08:02 +0200 (CEST)
From: MAILER-DAEMON at pubhealth.ku.dk (Mail Delivery System)
To: candrews at buffalo.edu
This is the Postfix program at host mail.pubhealth.ku.dk.
I'm sorry to have to inform you that your message could not
be delivered to one or more recipients. It's attached below.
For further assistance, please send mail to <post...
2003 Nov 18
4
address for bug reports? (PR#5171)
bug.report() tells me to email to r-bugs@r-project.org, whereas
the Web site http://www.r-project.org/ points me to
r-bugs@biostat.ku.dk.
Which should I believe?
Simon Fear
Senior Statistician
Syne qua non Ltd
Tel: +44 (0) 1379 644449
Fax: +44 (0) 1379 644445
email: Simon.Fear@synequanon.com
web: http://www.synequanon.com
Number of attachments included with this message: 0
This message (and any associated files...
2009 Nov 27
2
using reshape to do ANOVA mixed models
Hi,
I just started with R and I found that there are many options to rearrange
the data to do mixed models.
I want to use the reshape function. I have 2 between subject variables and
one within.
I was able to change the data structure but still - the result of the aov
functions are calculating everything as a within subject.
the table looks like this:
SerialNo breed treatment distance_1
2015 Nov 23
0
MKL Acceleration encouraging; need adjust package builds?
...essage-----
From: R-devel [mailto:r-devel-bounces at r-project.org] On Behalf Of Paul Johnson
Sent: Monday, November 23, 2015 09:28
To: R Devel List <r-devel at r-project.org>
Subject: [Rd] MKL Acceleration encouraging; need adjust package builds?
Dear R-devel:
The Cluster administrators at KU got enthusiastic about testing
R-3.2.2 with Intel MKL when I asked for some BLAS integration. Below I forward a performance report, which is encouraging, and thought you would like to know the numbers. Appears to my untrained eye there are some extraordinary speedups on Cholesky decomposition, de...
2012 May 08
1
what folder to run write_PACKAGES in?
...lapply(dirs, dir.create, recursive = TRUE, showWarnings = TRUE)
}
}
create_repo_tree("/tools/kran", c(2.13, 2.14, 2.15))
###########################################
My CRAN mirror is in a sister folder /tools/cran and that works
properly to be served at the address http://rweb.quant.ku.edu/cran.
I want our local testing thing to show at similar
http://rweb.quant.ku.edu/kran. Supposing the Apache web server magic
is done, I *believe* the following should work.
I dropped packages in the right version folders, and I wrote a script
that goes separately to each version number folde...
2003 Dec 18
3
diagnostic information in glm. How about N of missing observations?
...results will typically include N and the
number dropped because of missings. Without going back to R and
fiddling about to find the total number of rows in the dataframe, there
is no way to tell. Somewhat inconvenient. Do you agree?
--
Paul E. Johnson email: pauljohn at ku.edu
Dept. of Political Science http://lark.cc.ku.edu/~pauljohn
1541 Lilac Lane, Rm 504
University of Kansas Office: (785) 864-9086
Lawrence, Kansas 66044-3177 FAX: (785) 864-5700
2001 May 06
2
how to use by() and hist()
Hello,
I'm using R 1.2.2 on Sun Solaris.
I have data frame with 4 levels of factor "type". See the example data
frame below.
type token variance
20 ku n031ku10.10msmeanc 77199422
21 ku n031ku11.10msmeanc 55682249
22 ku n031ku12.10msmeanc 52003965
23 ti n031ti01.10msmeanc 54511040
24 ti n031ti02.10msmeanc 58940197
25 ti n031ti03.10msmeanc 46918442
I'd like to plot histograms by token type as listed in column 1 above.
I tried
b...
2003 Mar 01
2
density(), with argument of length 1 (PR#2593)
The following is from version 1.6.2 of R under Windows,
or 1.6.1 under Mac OSX/X11
> density(1)
Error in if (!(lo <- min(hi, IQR(x)/1.34))) (lo <- hi) || (lo <- abs(x[1])) || :
missing value where logical needed
I am not sure how this should be handled. I encountered it
in connection with densityplot(). In that connection, it
might be enough to modify density() so that it
2008 May 02
3
data transformation
...0
site2 20 21 1 1 1 0
site3 30 31 0 1 1 1
my desired new dataframe:
species lat lon
spec1 10 11
spec1 20 21
spec2 20 21
spec2 30 31
spec3 10 11
spec3 20 21
spec3 30 31
spec4 30 31
--
Christian Hof, PhD student
Center for Macroecology & Evolution
University of Copenhagen
www.macroecology.ku.dk
&
Biodiversity & Global Change Lab
Museo Nacional de Ciencias Naturales, Madrid
www.biochange-lab.eu
mobile ES .. +34 697 508 519
mobile DE .. +49 176 205 189 27
mail .. chof at bio.ku.dk
mail2 .. vogelwart at gmx.de
blog .. www.vogelwart.de
2005 Apr 03
1
Alpha releases from Copenhagen not mirrored?
Looking at http://cran.r-project.org/src/base-prerelease shows that the
latest alpha tarball is dated April 1. That page reveals its source via the
various ?D=A etc sorting links, and looking at Peter's page at
www.biostat.ku.dk, I do indeed see April 2 and 3 releases in Denmark. Has
anything dropped in Vienna?
Dirk
--
Better to have an approximate answer to the right question than a precise
answer to the wrong question. -- John Tukey as quoted by John Chambers
2004 Oct 22
3
dotplot & lattice problems: y axis values and bg color output in jpg
I have a linux system with Fedora Core 2 and R-2.0.
I was comparing plots made with plot() and dotplot() and discovered a
problem. Although the dots are positioned correctly, the numerical
labels in the dotplot y axis are not correct.
I put copies here:
http://lark.cc.ku.edu/~pauljohn/R/plotTrouble1.jpg
That is the "correct" one from plot, with the higest value on y showing
at 18.
http://lark.cc.ku.edu/~pauljohn/R/plotTrouble2.jpg
That is the dotplot one. The picture is basically the same, except the
numbers on the y axis only go up to 8. But the do...
1999 Apr 07
2
Bug list summary (automatic post)
...o verify because they pertain
to specific hardware or operating system versions. If you
have information to contribute, please do so.
If you happen to know how to fix a problem please send
patches to the bug repository, too.
New bugs are reported either through the web
interface at r-bugs.biostat.ku.dk or via email to
r-bugs@biostat.ku.dk. The bug.report() function can be
used to automate parts of the procedure on many systems.
Followups on older bugs can be done by including the string
"(PR#999)" in the Subject of an email (change 999 to the
actual reference number, of course!).
===...
2005 Nov 17
1
Predicting and Plotting "hypothetical" values of factors
...in a logistic
regression, then it is tough to plot the S-shaped curve that describes
the probabilities.
Here is some code with comments describing the difficulties that we have
found. Are there simpler, less frustrating approaches?
-----------------------------
# Paul Johnson <pauljohn at ku.edu> 2005-11-17
# factorFutzing-1.R
myfac <- factor(c(1.1, 4.5, 1.1, 1.1, 4.5, 1.1, 4.5, 1.1))
y <- c(0,1,0,1,0,0,1,0)
mymod1 <-glm (y~myfac, family=binomial)
p1 <- predict(mymod1, type="response")
plot(myfac,p1)
# Wait, that's not the picture I wanted. I want to...
2005 May 11
7
bug in modulus operator %% (PR#7852)
The following can't be right,
first rw2010:
> 1 %% 0.001
[1] 0.001
Then rw2001:
> 1 %% 0.001
[1] -2.081668e-17
>
and the last seems about right.
--
Kjetil Halvorsen.
Peace is the most effective weapon of mass construction.
-- Mahdi Elmandjra
--
No virus found in this outgoing message.
Checked by AVG Anti-Virus.
2000 Mar 13
3
problem with plot(...., xlim=c(5,0)) (PR#480)
plot(1:4,1:4,xlim=c(5,0),ylim=c(5,0))
shows axis labels as:
| | | | | |
0
rather than
| | | | | |
5 4 3 2 1 0
as I believe it used to do in some earlier version.
Thank you for R.
Rashid Nassar
--please do not edit the information below--
Version:
platform = i586-unknown-linux
arch = i586
2016 Feb 12
2
configure statement for R-devel with updated zlib in user account
I'm aware R-devel no longer includes zlib. This works find on
up-to-date Linux systems.
On the older Centos 6 cluster at KU, they have zlib tool old for
R-devel. The R-devel configure fails thus:
checking if zlib version >= 1.2.5... no
checking whether zlib support suffices... configure: error: zlib
library and headers are required
In other software, I've seen this kind of thing, so I installed zlib
1.2.8 into...