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...tput below that I hope will help in figuring this out. Is there anything else that would be useful to know? I can also ask our sysadmin for help if that makes more sense than asking you all via r-help. Thanks very much in advance for any ideas, Janet Young --------------- [2] zork20:/home/jayoung> uname -a Linux zork20 2.6.12-1.1381_FC3smp #1 SMP Fri Oct 21 04:03:26 EDT 2005 i686 athlon i386 GNU/Linux [3] zork20:/home/jayoung> setenv MAKE gmake [4] zork20:/home/jayoung> which gmake /usr/bin/gmake [5] zork20:/home/jayoung> gmake -version GNU Make 3.80 Copyright (C) 2002 Free S...

...o/bin:/ usr/ccs/bin:/usr/sfw/bin unsetenv R_HOME ./configure --enable-R-shlib R_PAPERSIZE='letter' --prefix='/home/ btrask/traskdata' make ---------------------------- Here's some information on compiler versions, etc, etc ---------------------------- [72] bedrock:/home/jayoung> uname -a SunOS bedrock 5.10 Generic_139555-08 sun4v sparc SUNW,Sun-Fire-T200 [17] bedrock:/home/jayoung> which gcc /opt/gcc/bin/gcc [18] bedrock:/home/jayoung> gcc -v Using built-in specs. Target: sparc-sun-solaris2.10 Configured with: /net/tibia/export/bldmstr/nightly/ 20060817_mars_g...

Hi, I am having trouble getting RMySQL running on a solaris machine. [43] bedrock:/home/jayoung/source_codes/R/other_packages> uname -a SunOS bedrock 5.10 Generic_118833-36 sun4v sparc SUNW,Sun-Fire-T200 I thought I had finally managed to get it installed, albeit with some warnings that I didn't understand (it took me a while to find where our mysql libraries were), but when I tri...

...2.9.0 but am having trouble on our solaris machine. I had previously installed 2.8.1 and earlier versions without trouble. I'm using R-patched_2009-05-20.tar.gz (I had also tried the 2009-05-10 version). Here's some info on our machine (I'm not the sysadmin): [2] bedrock:/home/jayoung> uname -a SunOS bedrock 5.10 Generic_118833-36 sun4v sparc SUNW,Sun-Fire-T200 Here's how I have been successfully installing the last few versions of R: setenv LD_LIBRARY_PATH /home/jayoung/mysql/mysql-5.0.45-solaris10- sparc-64bit/lib:/opt/SUNWspro/lib:/usr/lib:/usr/openwin/lib setenv...

...else you'd like to see. thanks, Janet ------------------------------------------------------------------- Dr. Janet Young Fred Hutchinson Cancer Research Center 1100 Fairview Avenue N., C3-168, P.O. Box 19024, Seattle, WA 98109-1024, USA. tel: (206) 667 1471 fax: (206) 667 6524 email: jayoung ...at... fhcrc.org ------------------------------------------------------------------- ######## on 64-bit node > library(XML) > fileName <- system.file("exampleData", "test.xml", package="XML") > fileName [1] "/home/btrask/traskdata/lib_l...

...than causing R to crash. Thanks, Janet Young ------------------------------------------------------------------- Dr. Janet Young Fred Hutchinson Cancer Research Center 1100 Fairview Avenue N., C3-168, P.O. Box 19024, Seattle, WA 98109-1024, USA. tel: (206) 667 1471 fax: (206) 667 6524 email: jayoung at fhcrc.org http://www.fhcrc.org/labs/trask/ ------------------------------------------------------------------- > mydata group outcome input 1 bA175B9 0.99370982 High 2 bA322N21 0.58099071 High 3 bA322N21 -0.05601471 High 4 bA322N21 -0.01608595 High 5 bA322N21...

Hi there, I'm trying to get some text in the outer margins of my plots and am having trouble - the margin text is overlapping my plots, even though the outer margin I'm trying to put it in is very big. I've simplified my problem down to this: ------------------------- X11(width=7.5,height=10) par(mfrow=c(6,1),oma=c(20,0,20,0), mar=c(0,3.1,1,2.1)) for (i in 1:6) {

Hi, I'm very much enjoying using the ape package to produce phylogenetic trees with colored branches (using edge.color). Is it also possible to specify that some branches should be drawn as dotted lines? That would be really useful. I've tried messing around with edge.width, but that doesn't seem to help me get dotted lines. thanks, Janet Young