search for: itayf

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2006 Oct 09
3
Yum, duplicate packages, 4.3->4.4 upgrade.
Hi, I am running a CentOS 4.3 machine. I wish to move on to 4.4. My problem is that I have some 60 duplicate packages listed below. The kernel and gpg-pubkey packages are different versions of the same (none for the gpg) architecture. All the rest are a x86_64 and i[356]86 pairs. 1. Is this a problem? 2. If yes, what should I do? a) remove the duplicates (the i[356]86) and then 4.3 ->
2004 Jun 14
3
How to 'stamp' a plot with meta-data?
...pointers as to how to do it are appreciated. Even partial solution in which the plot is set up to accomodate metadata in the margins, but the data needs to be added manually after plot()ting will be great. Thanks in advance, Itay -------------------------------------------------------------- itayf at fhcrc.org Fred Hutchinson Cancer Research Center
2003 Dec 30
2
regexp problem on R 1.7.0
...I can tell the last attempt should have worked, too. Could someone explain to me why it doesn't? I have R 1.7.0 on RedHat 9. Thanks in advance, Itay Furman ========================================================================= Fred Hutchinson Cancer Research Center email: itayf at fhcrc.org 1100 Fairview Avenue N., Mailstop D4-100 phone: +1 (206) 667 5921 P.O. Box 19024 fax: +1 (206) 667 2917 Seattle, WA 98109-1024
2005 Apr 05
3
How to do aggregate operations with non-scalar functions
.... So, is there a simple way to convert the object returned by by() into a data.frame? Or, is there a better way to go with this? Finally, if I should roll my own coercion function: any tips? Thank you very much in advance, Itay ---------------------------------------------------------------- itayf at u.washington.edu / +1 (206) 543 9040 / U of Washington
2006 Nov 11
2
Strange yum behavior
...n.org/RPM-GPG-KEY-karan.org.txt enabled=1 baseurl=http://centos.karan.org/el$releasever/extras/stable/$basearch/RPMS/ # Need a ftp mirror ? uncomment the line below, & disable the one above # baseurl=ftp://rpm.karan.org/pub/kbsingh/el$releasever/extras/stable/$basearch/RPMS/ #== 2006-07-10 <itayf at fastmail.fm> protect plugin config ==# protect = 0 exclude = *.i386 *.i586 *.i686 includepkgs = darcs darcs-server prozilla R
2006 Jul 06
4
LVM Input/output error
Hi, I recently installed centos for the first time and I like it! Also, I just started working with lvm. The following warnings are genertated whenever I run one of lvm commands on the external usb disk (MyBook by Western Digital). * What could be the source for those messages? * Should I worry about them (writing into the created LV's seems to work)? * If yes, how to fix them? [root
2004 Feb 19
1
piece wise application of functions
...is the result of applying the same function on strs.missgp$ic[1]. Then, I want to repeat the whole thing with missgp1,2 instead of missgp0, generating case1,2 data frames. How should I do it? Thanks in advance, Itay Furman -------------------------------------------------------------------- itayf at fhcrc.org Fred Hutchinson Cancer Research Center
2004 Jan 15
2
Legend text -- discrepancy between X11 and postscript
...e bottom-right corner. legend(xlim[2], ylim[1], "A set of random numbers", lty=1, col=2, xjust=1, yjust=0) ## On the screen: OK. Now produce EPS file. dev.copy2eps(file="test.eps", paper="letter") ######################### End example ################## -- itayf at fhcrc.org
2006 Oct 02
1
OT: Precautions before draining laptop battery?
Hi, I have found some advice on the web regarding battery draining, but no linux-specific information. Are there some steps to be taken to protect the harddrive? Unmounting file-systems? I would appreciate any advice. Itay
2006 Dec 10
1
OT: profiling user applications
...bioinformatics tools. We are considering upgrading the OS (to centos :-), or embedding it in our institute grid. Having detailed information on the usage profile will help us to decide about the strategy, and to implement once decided. Thanks, Itay -- Itay Furman | sysadmin for Pilpel lab itayf at nospammail.net
2004 Apr 21
2
Extracting information from webpages
> Hello R Community, > > I would like to be able to download recent (yesterday's close is fine) > stock and > mutual fund prices from somewhere and use them for a personal finance > project. > Ideally, I would do this at a website of my choosing (e.g. > morningstar.com) and > have the possibility of getting a wide range of other information about > the security
2004 Jun 09
4
how to initialize random seed properly ?
I want to start R processes on multiple processors from single shell script and I want all of them to have different random seeds. One way of doing this is sleep 2 # (with 'sleep 1' I am often getting the same number) ... set.seed(unclass(Sys.time())) Is there a simpler way without a need to sleep between invoking different R processes ? Ryszard
2004 Mar 11
1
rsync + ssh: fails from cron
...sue, then?) I am aware that it is not strictly an rsync question, but this issue of using ssh surfaces up when ssh is _coupled_ to rsync and cron. I would appreciate any suggestions, comments, examples. Thanks a lot! Itay Furman -------------------------------------------------------------- itayf@fhcrc.org Fred Hutchinson Cancer Research Center
2004 Mar 25
1
How to add a top X-axis with a different logarithmic scale?
...Probably will need to rescale 'top.ticks' according to ## lower X-axis? axis(2) ### Restore par(old.par) ############################################################ Thanks in advance for any comments/suggestions. Itay ----------------------------------------------------------------- itayf at fhcrc.org Fred Hutchinson Cancer Research Center
2004 Feb 11
7
large fonts on plots
Hi all, I need to enlarge te fonts used oo R-plots (plots, histograms, ...) in labels and titles etc. I seem to be unable to figure out how to do it. The problem is that the titles of the plots are simply unreadable when I insert them into my LaTeX text, since they are relatively small compared to the entire plot. I am sure it is pretty simple, can anybody give me a hint ? Please reply
2004 Jan 15
4
invoking R scripts from a linux shell ?
Hello, I have written perl programs that extract data from a text file, process them, and create other text files, which I'd like to apply some statistics too (for example with R). I'd like to do it all in once , with a single script. I'm not familiar with R, I'd like to know if this task could be accomplished by creating a linux shells that launches the perl scripts and then
2004 Apr 14
3
dataframe: visualization as tiles(?)
Dear R users, I remember seeing somewhere a method of visualizing a set of observations on two variables x and y in the following way x=0 x=1 |-------| |-------| y=-1 | | | | |-------| | | | | |-------| | | | | |-------| y=0 | | | | |-------| |-------| | | |-------| |-------| y=1 | | |-------| |-------| |-------| where x = 0 or 1; y = -1, 0,
2006 Aug 01
0
Yum Transaction Check Error: package freetype-2.1.9-1.2.2.el4.rf
Hello list friends, I got the following error during yum update. How should I proceed to eliminate the probelm? (I thought perhaps to uninstall the .i386 package -- but there are some 15-20 other packages depending on it...) Repositories: dries, kbs-CentOS-Extras, update, rpmforge, base, addons, extras FWIW: the protectbase plugin was added on 2006-07-10. Thanks in advance, Itay
2007 Mar 11
0
Yum transaction checck error (x86_64)
<quote> [root]# yum install ffmpeg mplayerplug-in Loading "protectbase" plugin Setting up Install Process Setting up repositories ... A lot of output leading to ... Transaction Check Error: package gtk+-1.2.10-33.centos4 (which is newer than gtk+-1.2.10-33) is already installed </quote> I am not sure what is the problem and how it manifested itself. What to do now?