search for: ird

...s. It is a two classes data set, I used "N" and "P" to label the two. My question is, how do I get the predicted numerical value for each sample? Not just give me the label(either "N" or "P")? Thanks! FYI: The nnet example I followed from help document is, ird <- data.frame(rbind(iris3[,,1], iris3[,,2], iris3[,,3]), species = c(rep("s",50), rep("c", 50), rep("v", 50))) ir.nn2 <- nnet(species ~ ., data = ird, subset = samp, size = 2, rang = 0.1, decay = 5e-4, maxit = 200) table...

...quot;, 2, 1) ; draw.key(keyC, draw = TRUE, vp = viewport(.75, .9)) trellis.focus("panel", 3, 1) ; draw.key(keyF, draw = TRUE, vp = viewport(.75, .9)) trellis.focus("panel", 4, 1) ; draw.key(keyS, draw = TRUE, vp = viewport(.75, .9)) trellis.unfocus() -- Luis Tito de Morais IRD - UMR LEMAR (IRD/UBO/CNRS/IFREMER) Tél. : +33 2 98 49 86 35 Mob. : +33 6 37 67 21 40 Courriel-1 : Luis.Tito-de-Morais@ird.fr Courriel-2 : Luis.Titodemorais@univ-brest.fr Pages web : Lab. : http://www-iuem.univ-brest.fr/UMR6539/recherche/equipe-5 Pers. : http://ird.academia.edu/LuisTitodeMorais R...

...,extended=FALSE) I have attempted with regrexpr, sub, strsplit and many other character fonctions but I could not obtain the number of " " in each line, in order to further do a test on it. The answer may be trivial but at this time I gave up!! Cheers Nicolas Degallier UMR 7159 / IRD UR182 Laboratoire d'Oc?anographie et du Climat, Exp?rimentation et Approches Num?riques (LOCEAN) Tour 45-55, 4e ?t., case 100, 4 place Jussieu 75252 Paris Cedex 5 France t?l: (33) 01 44 27 51 57 fax: (33) 01 44 27 38 05 E-mail: <Nicolas.Degallier at ird.fr> pdf reprints (login="...

...my question is : how could I add a custom-built family of distributions that I could call in glmer/glmmADMM ? if it's not possible, I am considering imputing fake values to replace the censored ones, but I am unsure whether this is bad or very bad... Eric Elguero MIVEGEC (UM1- UM2 -CNRS 5290-IRD 224) Maladies infectieuses et vecteurs : ?cologie, g?n?tique, ?volution et contr?le Centre IRD de Montpellier 911 Av Agropolis - BP 64501 34394 Montpellier Cedex

...000 2 Abaia01 1200 2 Abaia01 1400 2 Abaia01 1600 2 Abaia01 1800 2 Abaia01 2000 2 Abaia02 200 2 Abaia02 400 2 Abaia02 600 2 Abaia02 800 2 Abaia02 1000 2 Abaia02 1200 2 Abaia02 1400 2 Abaia02 1600 2 Abaia02 1800 3 Abaia02 2000 3 etc.. I would like to fill this more complete table here wich has a third factor "L5_code" (L5_code = type of habitat). As you can see, there are several types of habitats within each buffer around a station (up to several dozens). TABLE 2 station buffer L5_CODE S Abaia01 200 14 2 Abaia01 200 11 2 Abaia01 400 14 2 Abaia01 400 11 2 Abaia01 600 14 2 Abaia01...

...dependency tree Reading state information... Done libpoppler-cpp-dev is already the newest version (0.41.0-0ubuntu1.1). 0 upgraded, 0 newly installed, 0 to remove and 107 not upgraded. Therefore, I assume I have this installed. Best regards, Eduardo 2016-12-02 9:25 GMT-02:00 francois Guilhaumon IRD < francois.guilhaumon at ird.fr>: > Hello, > > > libpoppler-cpp-dev is not an R package but a system library to be > installed with (for example) : > > sudo apt-get install libpoppler-cpp-dev > > > hope this help. > > > > Fran?ois Guilhaumon > &gt...

I'm looking for a tutorial or notes on the use of contrasts factor in linear model in R, I've found some mails and infos about in various documents about R, but I've probably missed a good review on this subject. -- Robert Espesser Laboratoire Parole et Langage UMR 6057, CNRS 29 Av. Robert Schuman 13621 AIX (FRANCE) Tel: +33 (0)4 42 95 36 26 Fax: +33 (0)4 42 59 50

Hi, I am trying to install pdftools package on R 3.3.1 (Ubuntu 16.04), but the following issue occurs: ------------------------- ANTICONF ERROR --------------------------- Configuration failed because poppler-cpp was not found. Try installing: * deb: libpoppler-cpp-dev (Debian, Ubuntu, etc) * rpm: poppler-cpp-devel (Fedora, CentOS, RHEL) * csw: poppler_dev (Solaris) * brew: poppler (Mac OSX)

Dear All I have problem with this: > IWJR.temp <-IWJR.missing[sample(1:length(IWJR.missing),1),] Error: subscript out of bounds How I can solved this. Thanks IRD

...xample of the problem I'm experiencing. Any ideas on how to get around it or will it simply not work with nnet()? > library(MASS) > library(nnet) > library(ipred) > data(iris3) > set.seed(191) > > samp <- c(sample(1:50,25), sample(51:100,25), sample(101:150,25)) > ird <- data.frame(rbind(iris3[,,1], iris3[,,2], iris3[,,3]), + species = factor(c(rep("s",50), rep("c", 50), rep("v", 50)))) > errorest(species ~., data = ird, subset = samp, model = nnet, > size = 2, rang =0.1, decay = 5e-4, maxit = 200) # weights: 19...

...error > if (grep("Time",nomfichier)<>0) {for (i in 1:lat) a[i,which(a[i,] ==-9999|a[i,]==9999|a[i,]==9998|a[i,]==-9998)] <- NA} Erreur : syntax error > I would appreciate if someone can show me the right way to do this. Sincerely Nicolas Nicolas Degallier UMR 7159 / IRD UR182 Laboratoire d'Oc?anographie et du Climat, Exp?rimentation et Approches Num?riques (LOCEAN) Tour 45-55, 4e ?t., case 100, 4 place Jussieu 75252 Paris Cedex 5 France t?l: (33) 01 44 27 51 57 fax: (33) 01 44 27 38 05 E-mail: <Nicolas.Degallier at ird.fr> pdf reprints (login="...

...ying to install in my R environment the rhdf5 package and library but it seems to have vanished from either the CRAN or BioConductors sites. Can you tell me where it would be possible to find it or any R library (or function) able to read hdf files? Sincerely, Nicolas Degallier UMR 7159 / IRD UR182 Laboratoire d'Oc?anographie et du Climat, Exp?rimentation et Approches Num?riques (LOCEAN) Tour 45-55, 4e ?t., case 100, 4 place Jussieu 75252 Paris Cedex 5 France t?l: (33) 01 44 27 51 57 fax: (33) 01 44 27 38 05 E-mail: <Nicolas.Degallier at ird.fr> Publications (anonymous f...

...mportant for the graph. Maybe stars() is totally inadequate for the purpose. If no other solution is available in R, I will try to write down my own and post it. But it may take me a while as I am a newbie in R. Any hint will be appreciated. Regards, Tito -- L. Tito de Morais UR RAP IRD de Dakar BP 1386 Dakar S?n?gal T?l.: + 221 849 33 31 Fax: +221 832 16 75 Courriel: tito at ird.sn

...the function several times and see if a consensus emerges, but that doesn't seem to be the case, and besides, I would like to know what really is going on. thanks Eric Elguero Laboratory Genetics and Evolution of Infectious Diseases, Team: Genetics and Adaptation of Plasmodium UMR 2724 CNRS-IRD, IRD Montpellier, 911 Avenue Agropolis, BP 64501, 34394 Montpellier Cedex 5, France > f4.U.spDA <- stepclass(f.mes, f.gp4, "lda",improvement=0.01,prior=rep(0.25,4)) `stepwise classification', using 10-fold cross-validated correctness rate of method lda'. 89 observation...

...am using R 1.7.1 on linux Mandrake 9.1 Thank you for your help Tito > version _ platform i686-pc-linux-gnu arch i686 os linux-gnu system i686, linux-gnu status major 1 minor 7.1 year 2003 month 06 day 16 language R -- L. Tito de Morais UR RAP IRD de Dakar BP 1386 Dakar S?n?gal T?l.: + 221 849 33 31 Fax: +221 832 16 75 Courriel: tito at ird.sn

...- table(u) indices <- as.numeric(names(tu)) x[indices] <- x[indices]+tu but it looks ugly to me and I would prefer to avoid calling the function 'table' since this is to be done millions of times as part of a simulation program. Eric Elguero G?n?tique & Adaptation des Plasmodium IRD Montpellier - FRance

...vector, say u and I want a single string, but >paste(u) doesn't work, so I would like something like >paste(unvector(u)). I am interested in a solution to the general problem too, as the only one I found is maintaining two versions of the functions I write. Eric Elguero GEMI-UMR 2724 IRD-CNRS, Equipe "Evolution des Systemes Symbiotiques" 911 avenue Agropolis, BP 64501, 34394 Montpellier cedex 5 FRANCE

Full_Name: Emmanuel Paradis Version: 2.1.1 OS: Linux Submission from: (NULL) (193.49.41.105) read.fwf(..., header = TRUE) does not work properly since: 1/ the original header is printed on the console and not in FILE; 2/ the different 'parts' of the header should be separated with tabs to work with the call to read.table. Here is a suggested fix for src/library/utils/R/read.fwf.R:

...f88106638a640 (stale): WR flushed Jul 30 18:19:26 n001 kernel: nfs: server 10.10.11.100 not responding, still trying Jul 30 18:19:36 n001 kernel: nfs: server 10.10.10.100 not responding, timed out Jul 30 18:19:38 n001 kernel: rpcrdma: connection to 10.10.11.100:20049 on mlx4_0, memreg 5 slots 32 ird 16 Jul 30 18:19:38 n001 kernel: nfs: server 10.10.11.100 OK Jul 31 14:42:08 n001 kernel: RPC: rpcrdma_sendcq_process_wc: frmr ffff8810671f02c0 (stale): WR flushed Jul 31 14:42:08 n001 kernel: RPC: rpcrdma_sendcq_process_wc: frmr ffff8810677bda40 (stale): WR flushed Jul 31 14:42:08 n00...

...contours adjusted? 3) to obtain the colours of the first figure with "filled.contour" function? A subsidiary question is yet: how to obtain levels lines thicker and/ or in other colour only for specified values of z1? Many thanks in advance. Sincerely, Nicolas Degallier UMR 7159 / IRD UR182 Laboratoire d'Oc?anographie et du Climat, Exp?rimentation et Approches Num?riques (LOCEAN) Tour 45-55, 4e ?t., case 100, 4 place Jussieu 75252 Paris Cedex 5 France t?l: (33) 01 44 27 51 57 fax: (33) 01 44 27 38 05 E-mail: <Nicolas.Degallier at ird.fr> pdf reprints (anonymous ft...