search for: ipht

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2012 Jan 11
3
Command completion of the R binary / Ubuntu
...PHONE=C [11] LC_MEASUREMENT=de_DE.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] stats graphics grDevices utils datasets methods base -- Claudia Beleites Spectroscopy/Imaging Institute of Photonic Technology Albert-Einstein-Str. 9 07745 Jena Germany email: claudia.beleites at ipht-jena.de phone: +49 3641 206-133 fax: +49 2641 206-399 -------------- next part -------------- A non-text attachment was scrubbed... Name: bash_completion.diff Type: text/x-patch Size: 379 bytes Desc: not available URL: <https://stat.ethz.ch/pipermail/r-devel/attachments/20120111/49bdef24/a...
2012 Jan 11
3
Command completion of the R binary / Ubuntu
...PHONE=C [11] LC_MEASUREMENT=de_DE.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] stats graphics grDevices utils datasets methods base -- Claudia Beleites Spectroscopy/Imaging Institute of Photonic Technology Albert-Einstein-Str. 9 07745 Jena Germany email: claudia.beleites at ipht-jena.de phone: +49 3641 206-133 fax: +49 2641 206-399 -------------- next part -------------- A non-text attachment was scrubbed... Name: bash_completion.diff Type: text/x-patch Size: 379 bytes Desc: not available URL: <https://stat.ethz.ch/pipermail/r-devel/attachments/20120111/49bdef24/a...
2013 Apr 23
2
Needed: Beta Testers and Summer Camp Students
Greetings. I'm teaching linear regression this semester and that means I write more functions for my regression support package "rockchalk". I'm at a point now were some fresh eyes would help, so if you are a student in a course on regression, please consider looking over my package overview document here: http://pj.freefaculty.org/R/rockchalk.pdf That tells how you can grab
2011 Oct 13
1
Package snow: is there any way to check if a cluster is "acticve"
Is there a 'proper' way of checking if cluster is active. For example, I create a cluster called .PBcluster > str(.PBcluster) List of 4 $ :List of 3 ..$ con :Classes 'sockconn', 'connection' atomic [1:1] 3 .. .. ..- attr(*, "conn_id")=<externalptr> ..$ host: chr "localhost" ..$ rank: int 1 ..- attr(*, "class")= chr
2011 Jun 09
1
Data package questions
In process of creating data package from an existing one. The current package has both raw data files and the associated RData objects created from them. Currently, the data subdirectory is 1.5Mb and the extdata is 5.4Mb. Never having created a data package before, how is this best done? Should the data package contain only the raw data, or the RData objects too (tightly coupled)? If the later,
2013 Feb 12
1
Contribution
Hi, I am Parthasarathy G , from IIT Maras ( India ). I am currently in third year of the undergraduate course. I would like to contribute to the R project. Can anyone guide me regarding this? Thanking you, Parthasarathy [[alternative HTML version deleted]]
2013 Mar 06
1
Transpose a big data file and write to a new file
Dear all: I have a big data file of 60000 columns and 60000 rows like that: AA AC AA AA .......AT CC CC CT CT.......TC .......................... ......................... I want to transpose it and the output is a new like that AA CC ............ AC CC............ AA CT............. AA CT......... .................... .................... AT TC............. The keypoint is I can't read
2012 Aug 14
3
set working directory to current source directory
Hi all, Is there a way to get cran R to set the working directory to be wherever the source file is? Each time I work on a project on different computers I keep having to set the working directory which is getting quite annoying. Thanks, Sachin [[alternative HTML version deleted]]
2012 Mar 28
2
--as-cran / BuildVignettes: false
I have packages where I know CRAN and other test platforms do not have all the resources to build the vignettes, for example, access to databases. Previously I think putting BuildVignettes: false in the DESCRIPTION file resolved this, by preventing CRAN checks from attempting to run the vignette code. (If it was not this, then there was some other magic I don't understand.) Now, when
2012 Aug 14
0
as.numeric and as.character with locale using comma as separator
...; kann bewirken, dass R sich komisch benimmt as.numeric (as.character (x)) works as supposed (also output has decimal points again) Best, Claudia -- Claudia Beleites Spectroscopy/Imaging Institute of Photonic Technology Albert-Einstein-Str. 9 07745 Jena Germany email: claudia.beleites at ipht-jena.de phone: +49 3641 206-133 fax: +49 2641 206-399
2011 May 18
3
Help with 2-D plot of k-mean clustering analysis
Hi, all I would like to use R to perform k-means clustering on my data which included 33 samples measured with ~1000 variables. I have already used kmeans package for this analysis, and showed that there are 4 clusters in my data. However, it's really difficult to plot this cluster in 2-D format since the "huge" number of variables. One possible way is to project the
2013 Mar 18
2
OrgMassSpecR peak area issue
Hello! I am having an issue with the OrgMassSpecR package. I run my HPLC using a DAD detector. My raw data is exported form chemstation as a csv file. I then upload the csv into Rstudio no problem. Using the DrawChromatogram function, I get a nice chromatogram, and my retention time, peak area, and apex intensity values are given as well. The problem comes with the peak area value given. The
2012 Apr 02
2
R datasets ownership(copyright) and license
Dear R Developers, Recently filed (and dismissed ;) ) law suit by Astrolabe against tz database developers caused a lot of media-press and discussions and created some kind of precedence in the USA [3]. But also it imho showed that similar attacks might happen in the future, and possibly against data sets which are not that obviously "factual" thus after all might fall under copyright
2011 May 04
1
Outlier removal by Principal Component Analysis : error message
Hi, I am currently analysis Raman spectroscopic data with the hyperSpec package. I consulted the documentation on this package and I found an example work-flow dedicated to Raman spectroscopy (see the address : http://hyperspec.r-forge.r-project.org/chondro.pdf) I am currently trying to remove outliers thanks to PCA just as they did in the documentation, but I get a message error I can't
2012 Jan 12
3
remoting ESS/R with tramp
Tom Roche Thu, 12 Jan 2012 11:56:25 -0500 >>> * I have access to the cluster [where I want to run R] configured >>> [in .ssh/config] such that I can `ssh t` from commandline. >>> 1 I can open an R file on the cluster with >>> `C-x C-f /t:/home/me/onlyOrigDN2.r` >>> from my laptop, and note the following >>> *Messages* >>> >
2011 May 26
4
predictive accuracy
I am trying to develop a prognostic model using logistic regression. I built a full , approximate models with the use of penalization - design package. Also, I tried Chi-square criteria, step-down techniques. Used BS for model validation. The main purpose is to develop a predictive model for future patient population. One of the strong predictor pertains to the study design and would not
2012 Mar 27
11
CRAN policies
CRAN has for some time had a policies page at http://cran.r-project.org/web/packages/policies.html and we would like to draw this to the attention of package maintainers. In particular, please - always send a submission email to CRAN at r-project.org with the package name and version on the subject line. Emails sent to individual members of the team will result in delays at best. - run R