search for: heritibility

Hello, I'm looking for a method to estimate narrow sense heritability of traits in a RIL population. Papers I've checked either use either SAS or SPSS or do not give any details at all. I've found some reference to using variance components in ANOVA, using the kinship or wgaim packages, but I don't have a clue as to how to do any of this. Is there any way fro a very R illiterate

Hello, I add to my previous mail, the only way i found to disable acl "Domain Users" to be added is with : */inherit owner = yes/* This has the advantage to recopy exactly the default acl defined on the parent folder. But this has the disavantage to not show which user has created a folder/file and the ownership. Does something like "inherit group owner = yes" exist ?

Hi R help, I wanted to set a fixed heritability for the object "Trait" left of ~ operator. Is this possible using lme, or would I need to use something like gls? This is the model line contained within a function; lme.out <- summary(lme(Trait ~ genotype, random = ~1|sire, weights=~number, na.action="na.omit")) Many thanks for any help.

Edouard, No, that won't work for you.  "inherit acls" is intended for posix ACL's. Since you are using Windows ACL's, try setting the permissions/inheritance you want from a Windows system. Dale On 12/10/18 12:40 PM, Edouard Guigné wrote: > > Hello Dale, > > Set inherit acls = yes locally to my share groups, and remove map acl > inherit = yes from global

Hello Dale, I set map acl inherit = yes in global parameters of smb.conf and set inherit owner = yes locally to my share "groups" of smb.conf I have followed the wiki https://wiki.samba.org/index.php/Setting_up_a_Share_Using_Windows_ACLs It is indicated : "To configure shares using extended access control lists (ACL), you must enable the support in the |smb.conf| file. To enable

Hello, I set a share on a samba 4.7.1 as domain member with an Active Directory controler, this share is used by all domain users. All users from the AD domain have a primary group "Domain Users", and secondary groups to filter access on the folders of the share. I noticed that when a user create a sub-folder/file inside a "Top folder", the default permissions from the

Edouard, These are the 4 available parameters containing the word "inherit". inherit acls (S) inherit owner (S) inherit permissions (S) map acl inherit (S) Would "inherit acls" work for you? Dale On 12/10/18 10:56 AM, Edouard Guigné via samba wrote: > Hello, > > I add to my previous mail, the only way i found to disable acl

Hello Dale, Set inherit acls = yes locally to my share groups, and remove map acl inherit = yes from global parameters of smb.conf does not solve my issue. I still have acl "Domain Users" added to new folders/files. As i write in my previous email, the only way i found to disable acl "Domain Users" to be added was with : inherit owner = yes With some disavantages for users

I''ve got a bunch of operating systems installed in files which are emulating disks. Anyone know if there is a way to turn those into vmware style virtual disks? _______________________________________________ Xen-users mailing list Xen-users@lists.xensource.com http://lists.xensource.com/xen-users

Hi,I use the 'lmekin' model of the 'kinship' package of R in order to estimate heritability. I want to estimate the confidence interval of the variance coefficient and so I should use a bootstrap simulation. The pedigree file has 1386 subjects so I create a kinship matrix [1386*1386].This is the code of R I use: kfit2 <- lmekin(IT~1+AGE +(1|ID), dati1,

Dear R-list, maybe someone can help me with the following mixed-effects models problem, as I am unable to figure it out with the 'nlme-bible'. I would like to fit (in R, obviously) a so-called animal model (google e. g. "Heritability and genetic constraints of life-history" by Pettay et al.) to estimate the variance component that is due to genetic effects. The covariances of

I'm trying also to understand how to get the between-group variance out of a one-way ANOVA, but I'm beginning to think that in a sense, the variance does not exist. Emma said: *The model is response(i,j)= group(i)+ error(i,j)* Yes, if by group(i) you mean intercept + coefficient[i]. *we assume that group~N(0,P^2) and error~N(0,sigma^2) * Only the error is assumed to be a random

...> specifies the id of each individual, and the second column contains > simulated trait values. AGRM is the corresponding additive genetic > relationship matrix whose elements are equal to the genetic > correlation between individuals. > > The test data is simulated to have a heritibility of 0.8 (i.e. 80% of > the variation can be explained by genetic effects) > > My initial attempt has been: > > CM<-pdSymm(AGRM, ~1|animal) > lme(trait~1, data=pedigree, CM) > > but which ever combination I use I always get "invalid > formula for groups"....

Hello everybody, I try to work with TC for a little while in my study and there still are a few questions that I can\''t find any answer anywhere. Firts about qdisc and classes: - What is exactly the difference between qdsic and class ? They are so \"intimately tied together\" that i\''m not sure not make the difference. Why can\''t we have a qdsic HTB with

> Message: 24 > Date: Tue, 31 Jan 2006 18:22:52 +0000 > From: "Lutz Ph. Breitling" <lutz.breitling at gmail.com> > Subject: [R] Mixed-effects models / heterogeneous covariances > To: r-help at stat.math.ethz.ch > Message-ID: > <2e38a1c80601311022i2e1be92doa60b80b50b69eb0c at mail.gmail.com> > Content-Type: text/plain; charset=ISO-8859-1 > > Dear

-------- Original Message -------- Subject: [AGDG-LIST:405] R Computing Contest Date: Sat, 21 Oct 2006 12:08:13 -0400 From: Larry Schaeffer <lrs at uoguelph.ca> Reply-To: lrs at uoguelph.ca To: Animal Geneticist's Discussion <agdg-list at colostate.edu> For those that are interested only: R Computer Programming Challenge Given: y = Factor A + Factor B + b1(Covariate1) +

Hi all, Here is the context. We are running Samba in a DCE/DFS environnement on AIX box (4.3.3 and 5.2). We've patched the Samba source to support this environnement (although, we didn't created the patch, someone working for IBM US dit it). We are using Samba 2.2.7b and 2.2.8a. We have a lot of Samba connections (400-600 shares everytime, 24 hours per day). We were running with only

Hello, I'm trying to setup a Samba with ACL support. Everything is working fine BUT I have a problem when I try to change permission on a share from a Windows XP/2000 environment. When I select a directory and goes on the "Security" tab and change the permissions (for exemple set write for user xyz), it changes the ACL for the directory but it doesn't change the subfolders

Dear R users I would like to ask a question regarding to icc (intraclass correlation) or many biologists refer it to as repeatability. It is very useful to get icc for many reasons and it is easy to do so from linear mixed-effects models and many packages like psy, psychometric, aod and irr have functions to calculate icc. icc = between-group variance/(between-group variance + residual

describe MyController do integrate_views describe "A common base senario" do it "no longer integrates views" do be_careful end end end integrate_views affects an attribute in the class formed by the describe factory method. The second describe generates its own class, so integrate_views is OFF at that level. I''ve already spent far, far too much