search for: herit

Hello, I'm looking for a method to estimate narrow sense heritability of traits in a RIL population. Papers I've checked either use either SAS or SPSS or do not give any details at all. I've found some reference to using variance components in ANOVA, using the kinship or wgaim packages, but I don't have a clue as to how to do any of this. Is there...

Hello, I add to my previous mail, the only way i found to disable acl "Domain Users" to be added is with : */inherit owner = yes/* This has the advantage to recopy exactly the default acl defined on the parent folder. But this has the disavantage to not show which user has created a folder/file and the ownership. Does something like "inherit group owner = yes" exist ? chmod g+s has no effect on my c...

Hi R help, I wanted to set a fixed heritability for the object "Trait" left of ~ operator. Is this possible using lme, or would I need to use something like gls? This is the model line contained within a function; lme.out <- summary(lme(Trait ~ genotype, random = ~1|sire, weights=~number, na.action="na.omit")) M...

Edouard, No, that won't work for you.  "inherit acls" is intended for posix ACL's. Since you are using Windows ACL's, try setting the permissions/inheritance you want from a Windows system. Dale On 12/10/18 12:40 PM, Edouard Guigné wrote: > > Hello Dale, > > Set inherit acls = yes locally to my share groups, and rem...

Hello Dale, I set map acl inherit = yes in global parameters of smb.conf and set inherit owner = yes locally to my share "groups" of smb.conf I have followed the wiki https://wiki.samba.org/index.php/Setting_up_a_Share_Using_Windows_ACLs It is indicated : "To configure shares using extended access control lists (AC...

...rs. All users from the AD domain have a primary group "Domain Users", and secondary groups to filter access on the folders of the share. I noticed that when a user create a sub-folder/file inside a "Top folder", the default permissions from the "Top folder" are well herited, but the acl "Domain Users" is always added. I find a link  https://bugzilla.samba.org/show_bug.cgi?id=8938 about this. So I made a test with "acl_xattr:ignore system acls = yes" in my smb.conf ; but it seems to disable extended acl to some folders... This is not a solution...

Edouard, These are the 4 available parameters containing the word "inherit". inherit acls (S) inherit owner (S) inherit permissions (S) map acl inherit (S) Would "inherit acls" work for you? Dale On 12/10/18 10:56 AM, Edouard Guigné via samba wrote: > Hello, > > I add to my previous mail, the only way i found t...

Hello Dale, Set inherit acls = yes locally to my share groups, and remove map acl inherit = yes from global parameters of smb.conf does not solve my issue. I still have acl "Domain Users" added to new folders/files. As i write in my previous email, the only way i found to disable acl "Domain Users"...

I''ve got a bunch of operating systems installed in files which are emulating disks. Anyone know if there is a way to turn those into vmware style virtual disks? _______________________________________________ Xen-users mailing list Xen-users@lists.xensource.com http://lists.xensource.com/xen-users

Hi,I use the 'lmekin' model of the 'kinship' package of R in order to estimate heritability. I want to estimate the confidence interval of the variance coefficient and so I should use a bootstrap simulation. The pedigree file has 1386 subjects so I create a kinship matrix [1386*1386].This is the code of R I use: kfit2 <- lmekin(IT~1+AGE +(1|ID), dati1, varlist=list(kmat))kfit2kf...

Dear R-list, maybe someone can help me with the following mixed-effects models problem, as I am unable to figure it out with the 'nlme-bible'. I would like to fit (in R, obviously) a so-called animal model (google e. g. "Heritability and genetic constraints of life-history" by Pettay et al.) to estimate the variance component that is due to genetic effects. The covariances of the genetic random effects between observations are given by the different degrees of relatedness between the individuals examined. (I find it...

...random variable, and therefore it has no variance associated with it. The model does not predict a variance for it. One could compute the variance of the coefficients and call this a group variance, but it seems to me that isn't the right way to think about it. I'm trying to calculate a heritability value for a trait in an organism, defined as Vg/Vp, where Vg = variance due to genotype and Vp = total variance. The model is p~g, or p[i,j] = intercept + g_coefficient[i] + error[i,j]. But to get Vg, I think it is actually necessary to use a different model, where g is modelled as a rand...

...> specifies the id of each individual, and the second column contains > simulated trait values. AGRM is the corresponding additive genetic > relationship matrix whose elements are equal to the genetic > correlation between individuals. > > The test data is simulated to have a heritibility of 0.8 (i.e. 80% of > the variation can be explained by genetic effects) > > My initial attempt has been: > > CM<-pdSymm(AGRM, ~1|animal) > lme(trait~1, data=pedigree, CM) > > but which ever combination I use I always get "invalid > formula for groups&...

...ut qdisc and classes: - What is exactly the difference between qdsic and class ? They are so \"intimately tied together\" that i\''m not sure not make the difference. Why can\''t we have a qdsic HTB with a class CBQ within or reverse. - We have classes but is there any heritage (i\''m not sure it is the right word) somewhere: between qdiscs, between classes or between qdiscs and classes. About DSMARK, I don\''t understand the way it works: - What is the (mask, Value) ? What is it used for ? - Does it mark the packet or the structure in the kernel ?...

...plain; charset=ISO-8859-1 > > Dear R-list, > > maybe someone can help me with the following mixed-effects models > problem, as I am unable to figure it out with the 'nlme-bible'. > > I would like to fit (in R, obviously) a so-called animal model (google > e. g. "Heritability and genetic constraints of life-history" by Pettay > et al.) to estimate the variance component that is due to genetic > effects. The covariances of the genetic random effects between > observations are given by the different degrees of relatedness between > the individuals...

...iven: y = Factor A + Factor B + b1(Covariate1) + b2(Covariate2) + ... + bp(Covariate p) + animal + e where y is a single trait - vector of observations, Factors A and B are fixed with ma and mb levels respectively, Covariates 1 to p are fixed regressions and p is a general number but less than 20. Heritability is a variable and should be requested by the program. You are given a list of the animal IDs of animals with records, and their sires and dams. Sire and dam IDs are smaller than the IDs of their progeny, and all IDs go from 1 to n where n can be up to 10 million animals. Tasks: 1) Estimat...

...ic on it after the problem occurs, it will repeat in the next mins/hours. The problem has appear more than one year ago, and I'm hoping that I could completely correct it at the end of the summer. So since the guy that was working on the problem will be absent for 6 or more weeks, I've herited of the problem. I don't have a great experience with Samba so I post the problem here. I'm not asking you to resolve the problem, but any help would be appreciated. thanx Yannick Bergeron burgergold@hotmail.com yaberger@ca.ibm.com

Hello, I'm trying to setup a Samba with ACL support. Everything is working fine BUT I have a problem when I try to change permission on a share from a Windows XP/2000 environment. When I select a directory and goes on the "Security" tab and change the permissions (for exemple set write for user xyz), it changes the ACL for the directory but it doesn't change the subfolders

Dear R users I would like to ask a question regarding to icc (intraclass correlation) or many biologists refer it to as repeatability. It is very useful to get icc for many reasons and it is easy to do so from linear mixed-effects models and many packages like psy, psychometric, aod and irr have functions to calculate icc. icc = between-group variance/(between-group variance + residual

describe MyController do integrate_views describe "A common base senario" do it "no longer integrates views" do be_careful end end end integrate_views affects an attribute in the class formed by the describe factory method. The second describe generates its own class, so integrate_views is OFF at that level. I''ve already spent far, far too much