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heirarchal
2009 Jul 23
0
using k-means clustering in conjunction with heatmap.2 function
...t))), 3); km$cluster
heatmap.2(mat, col=redgreen(75), hclustfun=km, trace="none")
However, I'm not sure what I need to modify in the heatmap.2 list of
parameters to have the matrix reflect a k-means clustering. The above usage
will throw an error, since "km" is not a valid heirarchacal clustering
function. My question is, what should the heatmap.2() function look like in
order for it to show kmeans clustering?
I'm not even sure if I'm using the kmeans function in a way that's optimal
for producing heatmaps. I saw a post related to something like this in June
of 200...