search for: ggalli

Hi, I was trying to install the GGally package, but was getting errors. Here is what I get: > install.packages("GGally") Installing package(s) into ‘/Users/ts2w/Library/R/2.15/library’ (as ‘lib’ is unspecified) Warning in install.packages :   package ‘GGally’ is not available (for R version 2.15.2) >

GGally: a companion to GGplot2. GGally is a package built to produce plot matrices without the hassle of making viewports and labels yourself. GGally is built upon the GGplot2 framework. Keeping the functionality and feel of ggplot, GGally has shortened common function calls and added a few new ones. ggpairs, the main function within GGally, will take your data set and produce a plots

GGally: a companion to GGplot2. GGally is a package built to produce plot matrices without the hassle of making viewports and labels yourself. GGally is built upon the GGplot2 framework. Keeping the functionality and feel of ggplot, GGally has shortened common function calls and added a few new ones. ggpairs, the main function within GGally, will take your data set and produce a plots

Barret Schloerke wrote: > GGally: a companion to GGplot2. > Where is it available? I don't find it on CRAN or R-Forge -- Michael Friendly Email: friendly AT yorku DOT ca Professor, Psychology Dept. York University Voice: 416 736-5115 x66249 Fax: 416 736-5814 4700 Keele Street http://www.math.yorku.ca/SCS/friendly.html Toronto, ONT M3J 1P3 CANADA

Hi Keith,, ggpairs(dat1, upper = list(continuous = "density", combo = "box")) appears to be what you want. John Kane Kingston ON Canada > -----Original Message----- > From: kw1958 at gmail.com > Sent: Tue, 11 Jun 2013 09:25:48 -0400 > To: r-help at r-project.org > Subject: Re: [R] R-help Digest, Vol 124, Issue 12 > > Folks, > > Sorry for

Folks, Sorry for butting in here. I ran the code from John Kane below and it worked fine. I did however get a deprecation message suggesting the use of ggpairs from the GGally package to make this chart. Unfortunately I haven't found the correct incantation to get the diagonal to display the density plots using the "diag" parameter. Any suggestions? Just trying to learn,

Hi, A following function was kindly provided by GGally?s maintainer, Barret Schloerke. function(data, mapping, ...) { p <- ggplot(data = data, mapping = mapping) + geom_point(color = I("blue")) + geom_smooth(method = "lm", color = I("black"), ...) + theme_blank() + theme(panel.border=element_rect(fill=NA, linetype =

my data are matrix with 3 numeric columns. would like to have pairs plot with scatterplots in the upper with hist at the diag and with correlation at the lower. actually default pairs does almost what I want but looks semi awesome. Especially, i didn't find out how to remove the axes from the lower part where I do only want to display the numeric values correlations there and somehow axes

Hi, I am new to bioconductor, trying to install KEGGSOAP package, but got warnings() when installing and error message when trying to load the package, can anyone suggest what went wrong? many thanks John > source("http://bioconductor.org/biocLite.R") Bioconductor version 2.11 (BiocInstaller 1.8.3), ?biocLite for help > biocLite("KEGGSOAP") BioC_mirror:

Hi John (and other authors of ChoiceModelR package), I am experiencing a weird thing when using the function choicemodelr under R3.0.1. Before I updated to R3.0, I had used choicemodelr unde R2.15. It was always as fast or faster than exactly the same task in Sawtooth software. Now, I've tried to run it under R3.0.1. It seems to be doing the job. But something is slowing it down dramatically.

CRAN (and crantastic) updates this week New packages ------------ * DCGL (1.0) Bao-Hong Liu http://crantastic.org/packages/DCGL Functions for basic differential coexpression analyses: gene filtering, link filtering, DCG (Differentially-Coexpressed Gene) identification and DCL (Differentially-Coexpressed Links) identification.Two algorithms,named DCP and DCe, are provided for

Hi all, I believe there is an issue with passing NULL to the function I(). class(NULL) # "NULL" (as expected) print(NULL) # NULL (as expected) is.null(NULL) # TRUE (as expected) According to the documentation I() should return a copy of its input with class "AsIs" preprended: class(I(NULL)) # "AsIs" (as expected) print(I(NULL)) # list() (not expected!

Hola chic en s, querría construir mi primera función, y tengo una duda respecto al comando par( mfrow =c(3,3)). Primero de todo, tengo una tabla con 10 variables, para cada variable, unos 145 datos. Quiero representar para cada variable su gráfica de dispersión respecto a las demás. Es decir, coger la primera variable y la segunda, y hacer gráfica, coger la primera variable y la tercera, y hacer

CRAN (and crantastic) updates this week New packages ------------ * disclapmix (0.1) Maintainer: Mikkel Meyer Andersen Author(s): Mikkel Meyer Andersen and Poul Svante Eriksen License: GPL-2 http://crantastic.org/packages/disclapmix disclapmix makes inference in a mixture of Discrete Laplace distributions using the EM algorithm. * EstSimPDMP (1.1) Maintainer: Unknown Author(s):

CRAN (and crantastic) updates this week New packages ------------ * allan (1.0) Alan Lee http://crantastic.org/packages/allan Automates Large Linear Analysis Model Fitting * andrews (1.0) Jaroslav Myslivec http://crantastic.org/packages/andrews Andrews curves for visualization of multidimensional data * anesrake (0.3) Josh Pasek http://crantastic.org/packages/anesrake This