search for: escore

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2007 Jan 23
3
Query about extracting subsets from a table
Hi I am trying to process tabular data as follows: Data in the input file is of the form genome1 genome2 tree-dist log10escore Genome1 and genome2 are alphabetic. Tree-dist and log10escore are numeric. I wish to extract only those rows from this table where the log10escore is less than -3. data <-read.table(filename); data$log10escore = data$log10escore[ data$log10escore < -3]; I would like to use this pruned l...
2009 Oct 03
3
getting variables based on name
I have a file like this: a1,a2,a3,b1,b2,b3 1,2,3,4,5,6 0,1,2,3,4,5 ... In interactive command-line R, I type data<-read.table('file.txt', sep=',', header=TRUE) I then want to get all the columns which start with the letter a. For this particular file, I can the type: data[1:3] What if i don't know that the columns that start with 'a' are columns 1-3? Is there