search for: ead5

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2009 Dec 01
4
Package is loaded but functions are not exported
Hello, I wrote a package, which in the NAMESPACE file exports functions like this: exportPattern("^\\rh") On R-2.8 (Linux, 64), upon loading the package I have the rh functions present. On R-2.10, Mac OS X, (32 bit), it builds, loads, but the functions are not loaded, i.e the only function is rhyper (which is not from my package). Is there something wrong with my package setup?
2009 Nov 13
2
How to show all the functions and classes that are defined in a library?
library(some_library_name) Suppose I load a library. I'm wondering what command I should use to list all the functions, classes and variables defined in the library.
2009 Dec 02
2
Arithmetic on multiple files
Dear R-users, I'd like to perform arithmetic functions on 1000 files containing a 2000x2000 matrix. Can anyone advise? For example, File1 File2 Output 1 1 1 4 4 4 5 5 5 2 2 2 + 5 5 5 = 7 7 7 3 3 3 6 6 6 9 9 9 Muhammad -- Muhammad Rahiz | Doctoral Student in Regional Climate Modeling Climate Research
2009 Dec 05
1
R brush for SyntaxHighlighter
Hello, I've written a brush for R for the SyntaxHighlighter JavaScript library. It allows you to display R code on a web page with the proper syntax highlighting. It's available here: http://demitri.com/code Comments and suggestions for improvement are welcome! Cheers, Demitri
2009 Dec 08
2
automated image processing
Hi, I am looking for a R package which is capable to process and analysis pictures of tissues (stained) in an automatic way. I had a look on biops and EBImage (Bioconductor) but they are not automatic... Did you already use/know a such package ? Thanks, - Martial _________________________________________________________________ Tchattez en direct en en vidéo avec vos amis !
2009 Nov 09
1
\\signature macro generated by promptMethods
...} \section{Methods}{ \describe{ \item{\code{\signature(x = "track")}}{ ~~describe this method here } }} \keyword{methods} \keyword{ ~~ other possible keyword(s)} Romain -- Romain Francois Professional R Enthusiast +33(0) 6 28 91 30 30 http://romainfrancois.blog.free.fr |- http://tr.im/EAD5 : LondonR slides |- http://tr.im/BcPw : celebrating R commit #50000 `- http://tr.im/ztCu : RGG #158:161: examples of package IDPmisc
2009 Nov 20
1
Including local dynamic libraries
Hi All, I am trying to install the package rjags into a local library on a machine for which I do not have root permissions. Using the command: R CMD INSTALL --configure-args="--with-jags-include= ${JAGSBIN}/include/JAGS --with-jags-lib=${JAGSBIN}/lib/ --with-jags- modules=${JAGSBIN}/lib/JAGS/modules" CMD INSTALL -l ${JAGSBIN}/lib/ ../ rjags_1.0.3-12.tar.gz Where ${JAGSBIN} is
2009 Dec 04
2
selective subsetting of a correlation matrix
Dear All, I have a correlation matrix say 'M' (4000x4000) for 4000 genes and I want to subset it to 'N' (190x190) for 190 genes. The list of those 190 genes are in variable 't'. So the idea is to read the names of genes from variable 't' and subset the matrix M accordingly. Any thoughts are welcome! Best Lee [[alternative HTML version deleted]]
2009 Nov 13
5
Help with complicated regular expression
Colleagues, I am using R (2.9.2, all platforms) to search for a complicated text string using regular expressions. I would appreciate any help you can provide. The string consists of the following elements: SOMEWORDWITHNOSPACES any number of spaces and/or tabs ( any number of spaces and/or tabs integer any number of spaces and/or tabs ) Examples include: WORD ( 123 ) WORD(1 )
2009 Dec 02
4
problems installing R packages
Hi, I?m trying to install new package in R (version 2.4.0) under windows vista and i have problems. I always receive the same message: Erro en zip.unpack(pkg, tmpDir) : no fue posible abrir el archivo 'C:/Program Files/R/R-2.4.0/library/file2019500d/mprobit/libs/mprobit.dll' It can?t open the file. I check the compatibility with the version and is ok, I have no idea where's the problem
2009 Nov 20
6
How to: highlight R syntax on webpages ?
My question if in the Subject, but if to extend: I am specifically curious about WordPress blogs. But any solution will give me a lead. Thanks, Tal ---------------------------------------------- Contact me: Tal.Galili@gmail.com | 972-52-7275845 Read me: www.talgalili.com (Hebrew) | www.biostatistics.co.il (Hebrew) | www.r-statistics.com/ (English) [[alternative HTML version deleted]]
2009 Nov 19
5
Accessing list names in lapply
Hi, When using lapply (or sapply) to loop over a list, can I somehow access the index of the list from inside the function? A trivial example: df1 <- split( x=rnorm(n=100, sd=seq(from=1, to=10, each=10)), f=letters[seq(from=1, to=10, each=10)] ) str(df1) #List of 10 # $ a: num [1:10] -0.801 0.418 1.451 -0.554 -0.578 ... # $ b: num [1:10] -2.464 0.279 4.099 -2.483 1.921 ... # $ c: num