search for: dysta

...ce* package 'cluster' ... ** libs make[3]: Entering directory `/tmp/RtmpWX7ecF/R.INSTALL2aaf76ad/cluster/src' gcc -std=gnu99 -I/u/radford/R/R-2.12.0-rel2/include -I/usr/local/include -fpic -g -O2 -c clara.c -o clara.o g77 -fpic -g -O2 -c daisy.f -o daisy.o g77 -fpic -g -O2 -c dysta.f -o dysta.o gcc -std=gnu99 -I/u/radford/R/R-2.12.0-rel2/include -I/usr/local/include -fpic -g -O2 -c fanny.c -o fanny.o gcc -std=gnu99 -I/u/radford/R/R-2.12.0-rel2/include -I/usr/local/include -fpic -g -O2 -c init.c -o init.o g77 -fpic -g -O2 -c meet.f -o meet.o g77 -fpic -g -O2 -c...

...ownloaded 186Kb * Installing *source* package 'cluster' ... ** libs gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/ include -I/usr/local/include -fno-common -g -O2 -c clara.c -o clara.o g77 -fno-common -g -O2 -c daisy.f -o daisy.o g77 -fno-common -g -O2 -c dysta.f -o dysta.o g77 -fno-common -g -O2 -c fanny.f -o fanny.o g77 -fno-common -g -O2 -c meet.f -o meet.o g77 -fno-common -g -O2 -c mona.f -o mona.o gcc-3.3 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/ include -I/usr/local/include -fno-common -g -O2 -c pam.c -o pam.o gcc-3....

...make[3]: Entering directory `/tmp/Rtmpgxd64f/R.INSTALL33128ce7/cluster/src' gcc -std=gnu99 -I/home/tengfei/R/x86_64-pc-linux-gnu-library/2.13/R-devel/include -I/usr/local/include -fpic -g -O2 -c clara.c -o clara.o gfortran -fpic -g -O -c daisy.f -o daisy.o gfortran -fpic -g -O -c dysta.f -o dysta.o gcc -std=gnu99 -I/home/tengfei/R/x86_64-pc-linux-gnu-library/2.13/R-devel/include -I/usr/local/include -fpic -g -O2 -c fanny.c -o fanny.o gcc -std=gnu99 -I/home/tengfei/R/x86_64-pc-linux-gnu-library/2.13/R-devel/include -I/usr/local/include -fpic -g -O2 -c init.c -o init.o...

...to Fedora Core 4, but left R alone. R worked fine, until I trued to update.packages(). Even then, many packages updated just fine, but two of them, cluster and mgcv, failed with the following error message (using cluster as an example): gcc -shared -L/usr/local/lib -o cluster.so clara.o daisy.o dysta.o fanny.o meet.o mona.o pam.o spannel.o twins.o -lg2c -lm -lgcc_s /usr/bin/ld: cannot find -lg2c collect2: ld returned 1 exit status make: *** [cluster.so] Error 1 I tracked this down as far as I could and got to this page: http://gcc.gnu.org/fortran/usage.html in the section about "Compatab...

...ago, ended in failure. The package in question is cluster 1.9.6 which should be 2.0.0-ready. The (partial) log follows: ----------------------------------------------------------------------------- [...] g77 -mieee-fp -fPIC -g -O2 -c twins.f -o twins.o gcc -shared -o cluster.so clara.o daisy.o dysta.o fanny.o meet.o mona.o pam.o spannel.o twins.o -L/usr/lib/gcc-lib/i486-linux/3.3.4 -L/usr/lib/gcc-lib/i486-linux/3.3.4/../../.. -lfrtbegin -lg2c -lm -lgcc_s -L/usr/lib/R/lib -lR make[1]: Leaving directory `/tmp/buildd/cluster-1.9.6/src' ** R ** data ** moving datasets to lazyload DB ** prepa...

Greetings, I am reasonably experienced with R but I recently tried to do some clustering using the "cluster" package, in order to see if it would help. I only tried this once with the 1.3.1 version and it worked (I don't quite remember which method I used). Now, I tried with the 1.4.0 version and no clustering function seems to work with matrices that contain NAs, even though