Displaying 2 results from an estimated 2 matches for "drawheatmap".
2010 Feb 01
0
Biclust package: drawHeatmap()
Hi,
I was trying to draw a heatmap of the bicluster results. With the code given in the biclust package I can only get the heatmap for one cluster at a time (drawHeatmap function). Is there any way that I can get the heatmap for all the clusters at the same time?
The code that I am using (biclust documentation) is:
#Random 100x50 matrix with a single, up-regulated 10x10 bicluster
s2=matrix(rnorm(5000),100,50)
s2[11:20,11:20]=rnorm(100,3,0.3) # clust...
2010 Jul 12
1
Extract Clusters from Biclust Object
...blem Linda Garcia and Ram Kumar Basnet described; I have a
biclust object, containing several clusters. For drawing a heatmap, it is
possible to specify the cluster to be plotted. However, I'd like to extract
the clusters in this manner:
Cond.1 Cond.2
Gene - value - value
just like drawHeatmap specifies each cluster. Is there a way to extract
single clusters? E.g. like saying "Object at object3", meaning cluster no. 3 of
my biclust object? Unfortunately, the given answers I found in older posts
could'nt help me out...
Any help is strongly appreciated!
Best regards,
Chri...