search for: dists

Hello, I am mirroring the debian tree using rsync. I realised following bug. Version: 2.5.5-0.2 on Debian GNU/Linux. Rsync did not correct old symlinks. # ls -l debian-non-US/dists/ total 60 drwxr-xr-x 2 root root 4096 Apr 17 2001 Debian2.2r7/ drwxr-xr-x 2 root root 4096 Feb 28 2001 Debian3.0r0/ drwxr-xr-x 2 root root 4096 Nov 10 02:30 old-proposed-updates/ drwxr-xr-x 2 root root 4096 Apr 17 2001 oldstable/ drwxr-...

Dear all, I am getting an R CMD check warning about the PDF manual. I am having a hard time finding out what is wrong, here is the log of the Rd2pdf call. The full check (and other) log is at https://api.travis-ci.org/jobs/46373922/log.txt?deansi=true if anybody is interested, and the package itself is here: https://github.com/metacran/r-builder/tree/bintex/rbuildertest Thanks, Best, Gabor

On 29 May 2018 at 16:37, R P Herrold wrote: | On Tue, 29 May 2018, Dirk Eddelbuettel wrote: | | > On a CentOS 7 machine, I am at a loss with respect to an inability to run a | > full R CMD check as anything involving tex files ends in tears. | | Hi, Dirk | | Have fun at the upcoming conference at UIC | | I seem to have 56 font packages installed under CentOS 7 | locally, but then I work

>>>>> G?bor Cs?rdi <csardi.gabor at gmail.com> >>>>> on Thu, 8 Jan 2015 17:18:27 -0500 writes: > Dear all, > I am getting an R CMD check warning about the PDF manual. I am having a > hard time finding out what is wrong, here is the log of the Rd2pdf call. > The full check (and other) log is at >

On 05/29/2018 04:53 PM, Dirk Eddelbuettel wrote: > I noticed it with a local, not-public package -- but it appears to apply with > any source package. I replicated with pkgKitten straight off CRAN and after > checking that it has a six page manual there. I'm having trouble reproducing this one. In my fresh CentOS 7 VM, I can pull the pkgKitten source down, and run R CMD Rd2pdf

On a CentOS 7 machine, I am at a loss with respect to an inability to run a full R CMD check as anything involving tex files ends in tears. We followed the README at CRAN and installed a large number of tex-live packages on this machine. But when a manual is created, we end up with what follows below. Here, I chopped some of the error messages, the key seems to be 'Insufficient extension

Hi, The following command: R CMD Rd2pdf --no-preview --output=./tmp.pdf --title=test genefu-package.Rd run against this file: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/genefu/man/genefu-package.Rd (username: readonly; password: readonly) produces a very verbose error (see below) with R version 2.15.0 alpha (2012-03-07 r58622). The .Rd file has these lines in it: Version: \tab

Tom, On 30 May 2018 at 11:34, Tom Callaway wrote: | On 05/29/2018 04:53 PM, Dirk Eddelbuettel wrote: | > I noticed it with a local, not-public package -- but it appears to apply with | > any source package. I replicated with pkgKitten straight off CRAN and after | > checking that it has a six page manual there. | | I'm having trouble reproducing this one. In my fresh CentOS 7 VM, I

Hello all, I am trying write a fairly simple function that provide a quick way to calculate several distributions for a data set. I am trying to provide a function that has a argument that specifies which distribution is outputted (here "norm" or "cumu"). I also have a melt argument but that seems to be working fine. I have been able to get my function working well for just

Is there anyway to label axes in 3D plots with mathematical expressions? In the code below, I want to replace "delta_yrsed" with what "\Delta \widehat{yrsed}" represents in TeX, but the [xyz]lab parameters of title3d appear to only accept character strings. require("rgl") fn.delta.yrsed <- function(dist, delta.dist,

Hi, I am new to clustering and was wondering why pvclust using "maximum" as distance measure nearly always results in p-values above 95%. I wrote an example programme which demonstrates this effect. I uploaded a PDF showing the results Here is the code which produces the PDF file: ------------------------------------------------------------------------------------- s <-

Hi, is there a way to reference to a data object without copying it? For example I have a huge matrix called dist and I want two objects obj1 and obj2 to have a memeber dist that points to the matrix, but I don't want, for memory reasons, to copy the matrix twice. As far as I understand the following code will generate three copies of my data: dist <- some_code_that_generates_data

Hello I have some strange output from R and I try to understand how R works. Could you please help me with that? temp <- rbind (c(10,1),c(99,98)) > temp [,1] [,2] [1,] 10 1 [2,] 99 98 > dist(temp) 1 2 131.6435 > sqrt(dist(temp)) 1 2 11.47360 so far so good. until the nex line: when I try to do what i did before but adding the 1/(what I did

Hi, I have some data (lots of year,distance pairs), which I can straightforwardly boxplot: dists <- read.table("movedists.dat") with(dists,plot(as.factor(V1),V2)) If I want to plot these data as violin plots using vioplot, this approach doesn't work: > with(dists,vioplot(as.factor(V1),V2)) Error in Summary.factor(c(1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, : min not...

Howdy, R Grues I have enjoyed R, but I cannot solve one problem easily. Please help my problem. When I tried the R script, I got the following Error. This error results from input data file exported through a Excel spreadsheet software. Error in step(lm(pop.rate ~ as.numeric(year) + as.factor(policy) + as.numeric(nation.grant) + ?: ??number of rows in use has changed: remove missing values?

Dear all, I'm completely new to R and at first I must say that it is a great program! But I have a problem with the function isoMDS from the MASS package. I have this code which I load with source() from a file: x <- c(163.59514923926784, 150.01448475257115, ...... {here are some more values}) x.sort <- sort(x) x.dist <- dist(x.sort) library(MASS) x.mds <- isoMDS(x.dist)

Update SuSE Linux detection. Up to now everything with a /etc/SuSE-release file was treated as openSuSE. With this change SLES based distributions such as "SUSE Linux Enterprise Server", "SUSE Linux Enterprise Desktop" and "Novell Linux Desktop" will show up as "sles". The 'opensuse' detection was updated to handle older openSuSE releases as well as

Samba seems to have provisioned OK, but kinit cannot find the realm and I have some records missing that I don't know how to fix: itadmin at dc01:~$ kinit administrator at INTERNAL.KCS kinit: Cannot find KDC for realm "INTERNAL.KCS" while getting initial credentials itadmin at dc01:~$ host -t SRV _ldap._tcp.internal.kcs Host _ldap._tcp.internal.kcs not found: 3(NXDOMAIN) itadmin at

I would like to randomly shuffle a distance object, such as the one created by ade4{dist.binary} below. My first attempt, using sample(jc.dist) creates a shuffled vector, losing the lower triangular structure of the distance object. How can I Ishuffle the lower triangular part of a distance matrix without losing the structure? Thanks. --Dale x1 <- c(rep(0,4),1) x2 <- c(rep(0,2),rep(1,3))

Reid, First, thanks for the excellent overview. This seems like it will be very useful. I have a question about dist-check. You mention that it will triple the amount of disk space I am using. I am guessing its because it does the following: > 11. runs make dist > 12. runs make clean > 13. runs make dist-clean It it necessary for dist-check to run make dist? Why would we