search for: dgefa

...rib/gee_4.13-16.tar.gz' Content type 'application/x-gzip' length 55712 bytes (54 Kb) opened URL ================================================== downloaded 54 Kb * installing *source* package ?gee? ... ** libs gfortran -fpic -O2 -g -c dgedi.f -o dgedi.o gfortran -fpic -O2 -g -c dgefa.f -o dgefa.o gcc -I/usr/lib64/R/include -I/usr/local/include -fpic -O3 -g -std=gnu99 -c ugee.c -o ugee.o gcc -shared -Bdirect,--hash-stype=both,-Wl,-O1 -o gee.so dgedi.o dgefa.o ugee.o -lblas -lgfortran -lm -lgfortran -lm -L/usr/lib64/R/lib -lR /usr/bin/ld: cannot find -lblas collect2: ld retu...

...ase-core 2.14.1-1 r-base-dev 2.14.1-1 The problem comes when installing new source packages from CRAN using install.packages(). Below is a typical installation output: * installing *source* package ?gee? ... ** libs gfortran -fpic -O3 -pipe -g -c dgedi.f -o dgedi.o gfortran -fpic -O3 -pipe -g -c dgefa.f -o dgefa.o gcc -std=gnu99 -I/usr/share/R/include -fpic -O3 -pipe -g -c ugee.c -o ugee.o gcc -std=gnu99 -shared -o gee.so dgedi.o dgefa.o ugee.o -lblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath -L/usr/lib64/R/lib -lR /usr/bin/ld: cannot find -lquadmath collect2: ld returned 1 exit statu...

........... .......... .......... ...... downloaded 176Kb * Installing *source* package 'KernSmooth' ... ** libs g77 -mieee-fp -fPIC -g -O2 -c blkest.f -o blkest.o g77 -mieee-fp -fPIC -g -O2 -c cp.f -o cp.o g77 -mieee-fp -fPIC -g -O2 -c dgedi.f -o dgedi.o g77 -mieee-fp -fPIC -g -O2 -c dgefa.f -o dgefa.o g77 -mieee-fp -fPIC -g -O2 -c dgesl.f -o dgesl.o g77 -mieee-fp -fPIC -g -O2 -c linbin2D.f -o linbin2D.o g77 -mieee-fp -fPIC -g -O2 -c linbin.f -o linbin.o g77 -mieee-fp -fPIC -g -O2 -c locpoly.f -o locpoly.o g77 -mieee-fp -fPIC -g -O2 -c rlbin.f -o rlbin.o g77 -mieee-fp -fPI...

Installing odesolve in Raqua 1.8.0 or 1.8.1 under MacOSX gives the following message: Warning message: Installation of package odesolve had non-zero exit status in: install.packages(ui.pkgs, CRAN = getOption(where), lib = .libPaths()[1]) Moreover, in the source of odesolve is no makefile. Does anyone know how to get a proper installation? Maartje

..._lsoda.c: In function «call_lsoda": call_lsoda.c:109: attention : passing argument 1 of «initializer" from incompatible pointer type gfortran -fpic -g -O2 -c cfode.f -o cfode.o gfortran -fpic -g -O2 -c dgbfa.f -o dgbfa.o gfortran -fpic -g -O2 -c dgbsl.f -o dgbsl.o gfortran -fpic -g -O2 -c dgefa.f -o dgefa.o gfortran -fpic -g -O2 -c dgesl.f -o dgesl.o gfortran -fpic -g -O2 -c ewset.f -o ewset.o gfortran -fpic -g -O2 -c fdump.f -o fdump.o gfortran -fpic -g -O2 -c fnorm.f -o fnorm.o gfortran -fpic -g -O2 -c i1mach.f -o i1mach.o gfortran -fpic -g -O2 -c intdy.f -o intdy.o gfortran -fpic -g -O...

...in /sw/lib/R/library Version 1.4-0 on CRAN Update (y/N)? y [snip] Installing *source* package `KernSmooth' ... [snip] cc -I/sw/lib/R/include -I/sw/include -fno-common -g -O2 -c sstdiag.c -o sstdiag.o cc -bundle -bundle_loader /sw/lib/R/bin/R.bin -o KernSmooth.so blkest.o cp.o dgedi.o dgefa.o dgesl.o linbin.o linbin2D.o locpoly.o rlbin.o sdiag.o sstdiag.o -lf77blas -lcblas -latlas -L/usr/local/lib -lf2c -lm /usr/bin/ld: can't locate file for: -lf77blas make: *** [KernSmooth.so] Error 1 ERROR: compilation failed for package `KernSmooth' Installing *source* package `cluster'...

...ip' length 68133 bytes (66 Kb) opened URL ================================================== downloaded 66 Kb * installing *source* package ‘gee’ ... ** package ‘gee’ successfully unpacked and MD5 sums checked ** libs gfortran -fpic -g -O2 -c dgedi.f -o dgedi.o gfortran -fpic -g -O2 -c dgefa.f -o dgefa.o gcc -std=gnu99 -I/ebio/abt6/jmao/R/R-2.15.0/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c ugee.c -o ugee.o gcc -std=gnu99 -shared -L/usr/local/lib64 -o gee.so dgedi.o dgefa.o ugee.o -L/ebio/abt6/jmao/R/R-2.15.0/lib -lRblas -lgfortran -lm -lgfortran -lm installing to /ebio/...

I always followed http://cran.r-project.org/bin/linux/ubuntu/ to install R on Ubuntu 8.1. I had no errors before! > install.packages("XML") Warning in install.packages("XML") : argument 'lib' is missing: using '/usr/local/lib/R/site-library' --- Please select a CRAN mirror for use in this session --- Loading Tcl/Tk interface ... done trying URL

...Berwin ----- Edited output from attempt to install R-1.5.1-recommended ----- absentia:/opt/R/R-1.5.1-recommended$ R CMD INSTALL *.tar.gz Contains: MASS class nnet spatial * Installing *source* package 'KernSmooth' ... ** libs [...] gcc -shared -o KernSmooth.so blkest.o cp.o dgedi.o dgefa.o dgesl.o linbin.o linbin2D.o locpoly.o rlbin.o sdiag.o sstdiag.o -L/usr/local/lib -L/usr/local/share/icon.9.3.1/ilib -L/usr/local/lib/gcc-lib/i686-pc-linux-gnu/2.95.2 -L/usr/local/i686-pc-linux-gnu/lib -lreadline -ldl -lncurses -lg2c -lm ** R ** data Perl 5.005 required--this is only version 5....