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Got past my libgfortran issue ln -s /usr/lib64/libgfortran.so.3 /usr/lib/libgfortran.so Now if I could get RCurl and rstan installed. Thanks, Larry -----Original Message----- From: Tom Callaway [mailto:tcallawa at redhat.com] Sent: Friday, January 29, 2016 2:46 PM To: Patrick, Larry B [CSSM] <longplay at iastate.edu>; 'r-sig-fedora at r-project.org' <r-sig-fedora at r-project.org> Subject: Re: [R-sig-Fedora] rstan warning messages On 01/28/2016 09:07 AM, Patrick, Larry B [CSSM] wrote: > Looks to have libgfortran installed. > yum list installed | grep li...

...bcurl.so.4.1.1 Attached are the long logs from RCurl and rstan. Let me know if you spot something of concern. Hopefully I am good to go now. Thanks for the assist, Larry -----Original Message----- From: R-SIG-Fedora [mailto:r-sig-fedora-bounces at r-project.org] On Behalf Of Patrick, Larry B [CSSM] Sent: Wednesday, February 03, 2016 9:06 AM To: 'Tom Callaway' <tcallawa at redhat.com>; 'r-sig-fedora at r-project.org' <r-sig-fedora at r-project.org> Subject: Re: [R-sig-Fedora] rstan warning messages I used epel to install again. I removed the original installation...

On 02/03/2016 09:52 AM, Tom Callaway wrote: > Are you trying to build R and components for i686 rather than x86_64? Never mind. Your logs make it clear that you're building for x86_64. Can you share the output of: pkg-config --list-all |grep libcurl curl-config --libs rpm -V libcurl-devel libcurl I'm honestly baffled as to why the configure script is failing to find libcurl.pc on

...t could I check next? I do not have the following installed and will get that done and tested again. libcurl-devel libidn-devel Thanks, Larry -----Original Message----- From: Tom Callaway [mailto:tcallawa at redhat.com] Sent: Wednesday, January 27, 2016 12:32 PM To: Patrick, Larry B [CSSM] <longplay at iastate.edu>; 'r-sig-fedora at r-project.org' <r-sig-fedora at r-project.org> Subject: Re: [R-sig-Fedora] rstan warning messages On 01/27/2016 01:12 PM, Patrick, Larry B [CSSM] wrote: > RHEL 6 installed > R version 3.2.3 from EPEL installed > > Start...

...g-0.23-9.1.el6.x86_64 Attached is RCurl_logs.txt. Let me know if you would rather have it right in the email as it is extremely long log. Thanks, Larry -----Original Message----- From: Tom Callaway [mailto:tcallawa at redhat.com] Sent: Tuesday, February 02, 2016 10:35 AM To: Patrick, Larry B [CSSM] <longplay at iastate.edu>; 'r-sig-fedora at r-project.org' <r-sig-fedora at r-project.org> Subject: Re: [R-sig-Fedora] rstan warning messages On 02/01/2016 03:45 PM, Patrick, Larry B [CSSM] wrote: > Got past my libgfortran issue > ln -s /usr/lib64/libgfortran.so.3...

RHEL 6 installed R version 3.2.3 from EPEL installed Start R and use the following command, but got warnings! install.packages("rstan", dependencies = TRUE, repos = "http://cran.r-project.org/") ... g++ -m64 -shared -L/usr/lib64/R/lib -L/usr/local/lib64 -o RcppEigen.so RcppEigen.o RcppExports.o fastLm.o -L/usr/lib64/R/lib -lRlapack -L/usr/lib64/R/lib -lRblas -lgfortran -lm

...ve_handle Error: loading failed Execution halted ERROR: loading failed * removing '/usr/lib64/R/library/RCurl' Thanks, Larry -----Original Message----- From: Tom Callaway [mailto:tcallawa at redhat.com] Sent: Wednesday, January 27, 2016 1:02 PM To: Patrick, Larry B [CSSM] <longplay at iastate.edu>; 'r-sig-fedora at r-project.org' <r-sig-fedora at r-project.org> Subject: Re: [R-sig-Fedora] rstan warning messages On 01/27/2016 01:55 PM, Patrick, Larry B [CSSM] wrote: > Confirmed that gcc-gfortran is installed > Package gcc-gfortran-4.4...

Hey, All In principal component analysis (PCA), we want to know how many percentage the first principal component explain the total variances among the data. Assume the data matrix X is zero-meaned, and I used the following procedures: C = covriance(X) %% calculate the covariance matrix; [EVector,EValues]=eig(C) %% L = diag(EValues) %%L is a column vector with eigenvalues as the elements percent

On 01/28/2016 09:07 AM, Patrick, Larry B [CSSM] wrote: > Looks to have libgfortran installed. > yum list installed | grep libgfortran > libgfortran.x86_64 4.4.7-16.el6 @rhel-x86_64-server-6 > What else could I check? > > Installed libcurl-devel and libidn-devel. > yum list installe...

...#39;s dependencies has changed since prelinking S.?...... /usr/lib64/libcurl.so.4.1.1 Something definitely not looking good here. Thanks, Larry -----Original Message----- From: Tom Callaway [mailto:tcallawa at redhat.com] Sent: Wednesday, February 03, 2016 9:02 AM To: Patrick, Larry B [CSSM] <longplay at iastate.edu>; 'r-sig-fedora at r-project.org' <r-sig-fedora at r-project.org> Subject: Re: [R-sig-Fedora] rstan warning messages On 02/03/2016 09:52 AM, Tom Callaway wrote: > Are you trying to build R and components for i686 rather than x86_64? Never mind. Yo...