search for: crmda

...s() ) > alreadyHave <- desiredPackages %in% installedPackages > install.packages(desiredPackages[!alreadyHave], + dependencies = c("Depends"), + lib = TARGETLIB) trying URL 'http://rweb.crmda.ku.edu/cran/src/contrib/DiagrammeR_0.8.1.tar.gz' Content type 'application/x-gzip' length 3438156 bytes (3.3 MB) ================================================== downloaded 3.3 MB trying URL 'http://rweb.crmda.ku.edu/cran/src/contrib/emplik_1.0-2.tar.gz' Content type 'app...

...#39;RcppArmadillo' ... ** package 'RcppArmadillo' successfully unpacked and MD5 sums checked * checking LAPACK_LIBS: divide-and-conquer complex SVD available via system LAPACK ** libs g++ -I/tools/cluster/6.2/R/3.2.2_mkl/lib64/R/include -I/usr/local/include -I"/panfs/pfs.acf.ku.edu/crmda/tools/lib64/R/3.2/site-library/Rcpp/include" -I../inst/include -fpic -O3 -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c RcppArmadillo.cpp -o RcppArmadillo.o g++ -I/tools/cluster/6.2/R/3.2.2_mkl/lib64/R/include -I/usr/loc...

...#39;RcppArmadillo' ... ** package 'RcppArmadillo' successfully unpacked and MD5 sums checked * checking LAPACK_LIBS: divide-and-conquer complex SVD available via system LAPACK ** libs g++ -I/tools/cluster/6.2/R/3.2.2_mkl/lib64/R/include -I/usr/local/include -I"/panfs/pfs.acf.ku.edu/crmda/tools/lib64/R/3.2/site-library/Rcpp/include" -I../inst/include -fpic -O3 -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c RcppArmadillo.cpp -o RcppArmadillo.o g++ -I/tools/cluster/6.2/R/3.2.2_mkl/lib64/R/include -I/usr/loc...

...What's the preferred way to link to package documentation from a vignette using markdown? My current draft includes "[cumsum](https://stat.ethz.ch/R-manual/R-devel/library/base/html/cumsum.html)" to link to the help page for cusum{base} and "[KFAS](https://rweb.crmda.ku.edu/cran/web/packages/KFAS/KFAS.pdf)" to link to the pdf documentation for the KFAS package. This works, but it feels like an ugly hack, and I wonder if there might be some more elegant way of doing this (documented in a fine manual I have yet to find)? Thanks, Spencer

...mentation from a >> vignette using markdown? >> >> >> My current draft includes >> "[cumsum](https://stat.ethz.ch/R-manual/R-devel/library/base/html/cumsum.html)" >> to link to the help page for cusum{base} and >> "[KFAS](https://rweb.crmda.ku.edu/cran/web/packages/KFAS/KFAS.pdf)" to >> link to the pdf documentation for the KFAS package. This works, but it >> feels like an ugly hack, and I wonder if there might be some more >> elegant way of doing this (documented in a fine manual I have yet to find)? > You...

...libpth-prefix=$HOME/packages but still rejection, new zlib not found. -- Paul E. Johnson Professor, Political Science Director 1541 Lilac Lane, Room 504 Center for Research Methods University of Kansas University of Kansas http://pj.freefaculty.org http://crmda.ku.edu

...terday. So none of the beautiful repairs I implemented show up :( pj -- Paul E. Johnson Professor, Political Science Director 1541 Lilac Lane, Room 504 Center for Research Methods University of Kansas University of Kansas http://pj.freefaculty.org http://crmda.ku.edu

...dows users can see how easy this is to avoid? Respectfully yours, pj -- Paul E. Johnson Professor, Political Science Director 1541 Lilac Lane, Room 504 Center for Research Methods University of Kansas University of Kansas http://pj.freefaculty.org http://crmda.ku.edu

...he fonts in them. It would be very pleasant for me if pdf.options included an argument to turn on font embedding and have fonts always embedded. Always. Thanks for your time, as always. -- Paul E. Johnson http://pj.freefaculty.org Director, Center for Research Methods and Data Analysis http://crmda.ku.edu I only use this account for email list memberships. To write directly, address me at pauljohn at ku.edu.

...weird, even when there are spaces in values there are no quotation marks. Has anybody done this and verified that it matches CSV from MS Excel? If I succeed will you consider a patch? pj -- Paul E. Johnson http://pj.freefaculty.org Director, Center for Research Methods and Data Analysis http://crmda.ku.edu To write to me directly, please address me at pauljohn at ku.edu.

.... There are about 50 versions of GCC. It is easy enough ask for a newer one: $ module load gcc/4.9.2 It puts the gcc 4.9.2 binaries and shared libraries at the front of the PATHs. pj -- Paul E. Johnson http://pj.freefaculty.org Director, Center for Research Methods and Data Analysis http://crmda.ku.edu To write me directly, address me at pauljohn at ku.edu.

...rks. >> >> Has anybody done this and verified that it matches CSV from MS Excel? >> If I succeed will you consider a patch? >> >> pj >> -- >> Paul E. Johnson http://pj.freefaculty.org >> Director, Center for Research Methods and Data Analysis http://crmda.ku.edu >> >> To write to me directly, please address me at pauljohn at ku.edu. >> >> ______________________________________________ >> R-devel at r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/r-devel > > ______________________________...

...error message from R CMD check without "--as-cran" is informative, as it plainly states that .libPaths() does not seem to include the location where the packages are installed: ################################### $ R CMD check kutils_1.19.tar.gz * using log directory ?/home/pauljohn/GIT/CRMDA/kutils/package/kutils.Rcheck? * using R version 3.4.1 (2017-06-30) * using platform: x86_64-redhat-linux-gnu (64-bit) * using session charset: UTF-8 * checking for file ?kutils/DESCRIPTION? ... OK * checking extension type ... Package * this is package ?kutils? version ?1.19? * checking package nam...

...y. With newer version 1 editions of OpenMPI, such as 1.10 or 1.12 (I suspect any versions (> 1.6.5), the Rmpi generates an intimidating warning, but the cluster will stop when asked. -- Paul E. Johnson http://pj.freefaculty.org Director, Center for Research Methods and Data Analysis http://crmda.ku.edu To write to me directly, please address me at pauljohn at ku.edu.

...n exists. That might be time consuming for some summary() methods. pj -- Paul E. Johnson Professor, Political Science Director 1541 Lilac Lane, Room 504 Center for Research Methods University of Kansas University of Kansas http://pj.freefaculty.org http://crmda.ku.edu

To extwnd on Martin 's explanation : In factor(), levels are the unique input values and labels the unique output values. So the function levels() actually displays the labels. Cheers Joris On 15 Jun 2017 17:15, "Martin Maechler" <maechler at stat.math.ethz.ch> wrote: >>>>> Paul Johnson <pauljohn32 at gmail.com> >>>>> on Wed, 14 Jun

...9;m doing anything that breaks .Random.seed or other things that R's parallel uses in the environment. In case you don't want to wrestle with attachments, the same files are online in our SVN http://winstat.quant.ku.edu/svn/hpcexample/trunk/Ex66-ParallelSeedPrototype/ ## Paul E. Johnson CRMDA <pauljohn at ku.edu> ## Portable Parallel Seeds Project. ## 2012-02-18 Portable Parallel Seeds Project This is how I'm going to recommend we work with random number seeds in simulations. It enhances work that requires runs with random numbers, whether runs are in a cluster computing env...

...to link to package documentation from a > vignette using markdown? > > > My current draft includes > "[cumsum](https://stat.ethz.ch/R-manual/R-devel/library/base/html/cumsum.html)" > to link to the help page for cusum{base} and > "[KFAS](https://rweb.crmda.ku.edu/cran/web/packages/KFAS/KFAS.pdf)" to > link to the pdf documentation for the KFAS package. This works, but it > feels like an ugly hack, and I wonder if there might be some more > elegant way of doing this (documented in a fine manual I have yet to find)? You can include l...

...mplemented show up :( > > pj > > -- > Paul E. Johnson > Professor, Political Science Director > 1541 Lilac Lane, Room 504 Center for Research Methods > University of Kansas University of Kansas > http://pj.freefaculty.org http://crmda.ku.edu > > ______________________________________________ > R-devel at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel -- Peter Dalgaard, Professor, Center for Statistics, Copenhagen Business School Solbjerg Plads 3, 2000 Frederiksberg, Denmark Phone: (+45)...

...still rejection, new zlib not found. > > -- > Paul E. Johnson > Professor, Political Science Director > 1541 Lilac Lane, Room 504 Center for Research Methods > University of Kansas University of Kansas > http://pj.freefaculty.org http://crmda.ku.edu > > ______________________________________________ > R-devel at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel > [[alternative HTML version deleted]]