Displaying 20 results from an estimated 44 matches for "cran40".
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2023 Dec 04
2
Unable to add the CRAN apt repository
I just upgraded from Linux Mint 20 to 21 and am no longer able to add the CRAN
Ubuntu repository to my list of repositories. ?I am getting:
$> sudo /usr/bin/add-apt-repository "deb
https://cloud.r-project.org/bin/linux/ubuntu $(lsb_release -cs)-cran40/"
$> sudo apt update
Hit:1 http://security.ubuntu.com/ubuntu jammy-security InRelease
Hit:2 http://archive.ubuntu.com/ubuntu jammy InRelease
Hit:3 http://archive.ubuntu.com/ubuntu jammy-updates InRelease
Hit:4 http://archive.ubuntu.com/ubuntu jammy-backports InRelease
Ign:5 http://packages....
2020 Jun 25
4
Update on docker Python:3 and adding R:4.x
...txt ./
COPY languageserver-master ./
COPY radian-master ./
RUN pip3 install --no-cache-dir -r requirements.txt
EXPOSE 8080
RUN apt-key adv --keyserver keys.gnupg.net --recv-key
'E19F5F87128899B192B1A2C2AD5F960A256A04AF'
RUN echo "deb http://cloud.r-project.org/bin/linux/debian buster-cran40/"
>> /etc/apt/sources.list
RUN apt update \
&& apt-get install -y --no-install-recommends \
ca-certificates \
wget \
&& rm -rf /var/lib/apt/lists/*
## Now install R
## RUN apt install -t buster-cran40 r-base
## CMD ["R"]
CMD python
On Wed, Jun 24, 2020 at 4:...
2020 May 08
2
Xenial repository for R 4.0.0
Over a week ago (on r-help, my bad!) I raised a question of why the
ubuntu install instructions
https://cran.r-project.org/bin/linux/ubuntu/README.html
instruct users with a xenial-based system to use
deb https://cloud.r-project.org/bin/linux/ubuntu xenial-cran40/
Looking at https://cloud.r-project.org/bin/linux/ubuntu/
there is no xenial-cran40 directory. However,
https://cran.r-project.org/bin/linux/ubuntu/
does have this directory, and I managed to update a machine
still running Linux Mint 18.3 by putting in
deb https://cran.r-project.org/bin/linux/ubun...
2020 Jun 24
2
Update on docker Python:3 and adding R:4.x
I continue to receive an error installing R via dockerfile on a buster
image python:3.
E: The value 'buster-cran40' is invalid for APT::Default-Release as such a
release is not available in the sources
My starting point is the debian buster based Python:3 image adding a couple
of python specific configurations and then using the commands in the R
project documentation for installing R on Buster. I got slig...
2023 Dec 04
1
Unable to add the CRAN apt repository
...tu.com/ubuntu jammy-updates InRelease [119 kB]
Hit:4 http://packages.linuxmint.com victoria Release
Get:6 http://security.ubuntu.com/ubuntu jammy-security InRelease [110 kB]
Hit:7 http://archive.ubuntu.com/ubuntu jammy-backports InRelease
Get:8 https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/ InRelease
[3,626 B]
Get:9 https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/ Packages [41.2
kB]
A Mint problem?
?
On Mon, 2023-12-04 at 21:57 +0300, Ivan Krylov wrote:
> On Mon, 04 Dec 2023 13:41:47 -0500
> Steve Gutreuter <sgutreuter at gmail.com> wrote:
>
> > $&g...
2024 Jul 08
2
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
...nstructions listed here: https://cloud.r-project.org/bin/linux/ubuntu/. Please see below:
When I?m in interactive mode in my Docker container and I try the first line of suggested code, it results in the following:
:/# apt update -qq
W: GPG error: https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/ InRelease: At least one invalid signature was encountered.
E: The repository 'https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/ InRelease' is not signed.
W: An error occurred during the signature verification. The repository is not updated and the previous index files will be used...
2023 Dec 04
1
Unable to add the CRAN apt repository
On Mon, 04 Dec 2023 13:41:47 -0500
Steve Gutreuter <sgutreuter at gmail.com> wrote:
> $> sudo /usr/bin/add-apt-repository "deb
> https://cloud.r-project.org/bin/linux/ubuntu $(lsb_release
> -cs)-cran40/"
Looks like `lsb_release -cs` returns a Mint codename for you.
Thankfully, since we know that Linux Mint 21 is based on Ubuntu 22.04
"Jammy Jellyfish", it should be possible to replace $(lsb_release -cs)
with jammy when running the command. Does the jammy-cran40/
subdirectory work...
2020 Jun 25
0
Update on docker Python:3 and adding R:4.x
...--no-install-recommends \
> ca-certificates \
> wget \
> && rm -rf /var/lib/apt/lists/*
Any reason why you remove the contents of /var/lib/apt/lists? On my system,
this directory holds PGP signed information about each repository, so this may
well be the reason why later buster-cran40 is said not to be available in the
sources.
Johannes
>
> ## Now install R
> ## RUN apt install -t buster-cran40 r-base
>
> ## CMD ["R"]
> CMD python
>
> On Wed, Jun 24, 2020 at 4:38 PM Dirk Eddelbuettel <edd at debian.org> wrote:
> > On 24 June 20...
2020 Sep 16
2
Installing in RStudio Server in Windows WSL2
...es/360049776974-Using-RStudio-Server-in-Windows-WSL2
I am a novice so I might be making an obvious mistake, but I am receiving
an error in step 3 of the RStudio server setup. I entered the below code
into ubuntu:
sudo add-apt-repository 'deb https://cloud.r-project.org/bin/linux/ubuntu
focal-cran40/'
and I received the error message:
E: The repository 'https://cloud.r-project.org/bin/Linux/ubuntu
focal-cran40/ Release' does not have a Release file.
N: Updating from such a repository can't be done securely, and is therefore
disabled by default.
Am I missing something or do I...
2024 Jul 08
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
...nstructions listed here: https://cloud.r-project.org/bin/linux/ubuntu/. Please see below:
When I?m in interactive mode in my Docker container and I try the first line of suggested code, it results in the following:
:/# apt update -qq
W: GPG error: https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/ InRelease: At least one invalid signature was encountered.
E: The repository 'https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/ InRelease' is not signed.
W: An error occurred during the signature verification. The repository is not updated and the previous index files will be used...
2020 Jun 22
2
Docker build issue
...ions at Cran:R listed buster:4.01
instructions that I also added to my docker file. I decided to delete my
container and refresh over the weekend and my R install has been throwing
fits ever since. It looks like the cran:r and docker hub sites have
changed. It looks like a file in the debian buster-cran40 repository still
has a label for debian unstable.
Looking for answers!
Dave Lange
Kenmore, WA
last steps of the build log:
## Get:5 http://cloud.r-project.org/bin/linux/debian buster-cran40/
InRelease [4363 B]
## Get:6 http://deb.debian.org/debian buster/main amd64 Packages [7905 kB]
## Get:7 ht...
2020 Apr 28
3
CRAN R 4.0.0 for Ubuntu repos missing r-recommend dependency
...l 2020 at 12:05, Greg Siemon wrote:
> | I noticed that R 4.0.0 is now available for ubuntu on CRAN. I attempted
> to
> | do a clean install on 18.04 using:
> |
> | sudo apt install r-base
> |
> | after adding
> |
> | deb https://cloud.r-project.org/bin/linux/ubuntu bionic-cran40/
> |
> | to /etc/apt/sources.list.
> |
> | Unfortunately, apt reports that r-recommend is a dependency and it won't
> be
> | installed. Upon inspecting the R4.0 repos r-recommend is missing not only
> | for bionic but also for xenial and focal. It is exists for the 3.5 Repo...
2020 Jun 24
0
Update on docker Python:3 and adding R:4.x
On 24 June 2020 at 15:15, Dave Lange wrote:
| I continue to receive an error installing R via dockerfile on a buster
| image python:3.
| E: The value 'buster-cran40' is invalid for APT::Default-Release as such a
| release is not available in the sources
Do you have the Dockerfile in public repo we can look at?
| My starting point is the debian buster based Python:3 image adding a couple
This is an R list so please tell us more about Python:3. What it is...
2020 Apr 28
2
CRAN R 4.0.0 for Ubuntu repos missing r-recommend dependency
Hi Dirk,
Could there be a typo on
https://cloud.r-project.org/bin/linux/ubuntu/README.html? The installation
entries mention cran35 for R 4.0. Should that be cran40?
Best regards,
Thierry
ir. Thierry Onkelinx
Statisticus / Statistician
Vlaamse Overheid / Government of Flanders
INSTITUUT VOOR NATUUR- EN BOSONDERZOEK / RESEARCH INSTITUTE FOR NATURE AND
FOREST
Team Biometrie & Kwaliteitszorg / Team Biometrics & Quality Assurance
thierry.onkelinx at i...
2020 Jun 24
0
Update on docker Python:3 and adding R:4.x
...st for some specific application or for fun.
>
>
>
> On Wed, Jun 24, 2020 at 4:15 PM Dave Lange <umbrellahouse at gmail.com>
> wrote:
>
>> I continue to receive an error installing R via dockerfile on a buster
>> image python:3.
>> E: The value 'buster-cran40' is invalid for APT::Default-Release as such a
>> release is not available in the sources
>>
>> My starting point is the debian buster based Python:3 image adding a
>> couple
>> of python specific configurations and then using the commands in the R
>> project...
2024 Jul 11
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
Hi Marco,
Thank you for the follow up email.
In the line below, do I replace $(lsb-release -cs) with jammy (Ubuntu 22.04) or leave it alone:
Add-apt-repository ?deb https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/?
It?s good to know about installations for Bioconductor. I am not currently using it, but I may need it in the future for other projects.
Br,
Lauren
--
Lauren J. Gerber
Bioinformatician
Precision Systems Medicine (Kallioniemi) Research Group
iCAN ? Digital Precision Cancer Medicine Flagship
Inst...
2024 Jul 10
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
...le, if you want to follow the CRAN steps and get the R from the cloud.r-project.org server, you want to replace
&& add-apt-repository -y "ppa:marutter/rrutter4.0"
With
&& add-apt-repository "deb https://cloud.r-project.org/bin/linux/ubuntu $(lsb_release -cs)-cran40/"
The ppa repo is Michael Rutter personal repo on launchpad.net, which works just fine but is not the CRAN sanctioned way of getting the R package.
Now, both AMD64 and ARM64 (Intel and Mac chip) binaries for Ubuntu are available on cloud.r-project.org which will allow you to compile your Ubu...
2020 Apr 29
1
R-4.0.0 and Texlive 2020 installed on EmmabuntusDE4 (Debian Bullseye)
Hi Johannes,
Thank you for your comments. I run
sudo apt install -t bullseye-cran40 r-base
and have now the current R-4.0.0 in /usr/lib/R with links in the menus
and R-devel R-4.1.0 in ~/patrice/svn/R/r-devel/build. Perfect.
I used sid just to get the full Texlive 2020. I will probably not update
it for a while and have already removed (commented) the sid line in
sources.list...
2024 Jul 11
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
...th Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
Hi Marco,
Thank you for the follow up email.
In the line below, do I replace $(lsb-release -cs) with jammy (Ubuntu 22.04) or leave it alone:
Add-apt-repository ?deb https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/?
It?s good to know about installations for Bioconductor. I am not currently using it, but I may need it in the future for other projects.
Br,
Lauren
--
Lauren J. Gerber
Bioinformatician
Precision Systems Medicine (Kallioniemi) Research Group
iCAN ? Digital Precision Cancer Medicine Flagship
Inst...
2020 May 27
1
Install R 4 on Chromebook (unmet dependencies)
Hello,
I have tried to upgrade R to 4.0. I have added `deb
http://cloud.r-project.org/bin/linux/debian buster-cran40/` to
`/etc/apt/sources.list` (but I removed cran35). Btu when I run
`apt-get update; apt-get install r-base r-base-dev` I get an error. I
think it depends on r-base-core, since it depends on these obsolete
libraries:
```
$ sudo apt-get install r-base-core
Reading package lists... Done
Building depe...