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2004 Nov 18
4
Re: changing (core) function argument defaults?
>From: Patrick Connolly <p.connolly@hortresearch.co.nz> >To: "RenE J.V. Bertin" <rjvbertin@hotmail.com> >Subject: Re: [R] changing (core) function argument defaults? >Date: Thu, 18 Nov 2004 11:43:10 +1300 > >On Wed, 20-Oct-2004 at 07:48PM +0200, RenE J.V. Bertin wrote: > >|> Hello,
2004 Nov 18
4
Re: changing (core) function argument defaults?
>From: Patrick Connolly <p.connolly@hortresearch.co.nz> >To: "RenE J.V. Bertin" <rjvbertin@hotmail.com> >Subject: Re: [R] changing (core) function argument defaults? >Date: Thu, 18 Nov 2004 11:43:10 +1300 > >On Wed, 20-Oct-2004 at 07:48PM +0200, RenE J.V. Bertin wrote: > >|> Hello,
2002 Sep 18
2
More on list to data frame (was: Re: List to Data Frame
Hi, Now suppose I have just one list called FOO, which has 25 objects, e.g.: [[1]] 1 2 3 4 5 [[2]] 6 7 8 9 10 . . . And I want to do something like: FRED <- data.frame(cbind(unlist(FOO[[1]]), unlist(FOO[[2]]), # ... for all 25 subsets )) Is it possible to do this, without doing unlist(FOO[[i]]) 25
2004 Dec 21
4
Removing trailing spaces
Some years ago when I used S-PLUS, I seem to remember, there was a discussion about a simple method of removing trailing spaces from vector elements. I'd be fairly sure the same would work in R, but I can't find any mention of anything like it in the R archives or with help.search(). There are ways I could do it with substring(), but I seem to remember there was something more elegant.
2003 Apr 22
4
Default value for title in postscript function
I like the fact that the postscript function enables the possbiility of a more useful title than before. However, I'd prefer the default to be the file name. It's very simple for me to make my own postscript function that does just that simply by setting title = file. I always use onefile = TRUE, so it always works (so far). However, I'm a little reluctant to do that in case some
2003 Apr 22
4
Default value for title in postscript function
I like the fact that the postscript function enables the possbiility of a more useful title than before. However, I'd prefer the default to be the file name. It's very simple for me to make my own postscript function that does just that simply by setting title = file. I always use onefile = TRUE, so it always works (so far). However, I'm a little reluctant to do that in case some
2003 Apr 22
2
How do I get 10^4 to become 10000?
Of course, that's as trivial as it gets on the command line, but I can't work out how to get a column of numbers that are entered as "10^5" from its 'character' format into a numeric one? I feel a bit embarrassed asking such a simple question. Too much Easter.... Thanks -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188
2013 Jan 22
4
Simple use of dcast (reshape2 package)
Suppose I have a small dataframe > aa Target Eaten ID 50 TPP 0 1 51 TPP 1 2 52 TPP 3 3 53 TPP 1 4 54 TPP 2 5 50.1 GPA 9 1 51.1 GPA 11 2 52.1 GPA 8 3 53.1 GPA 8 4 54.1 GPA 10 5 And I want to reshape it into ID TPP GPA 1 1 0 9 2 2 1 11 3 3 3 8 4 4 1 8 5 5 2 10 I realise that
2002 Oct 28
2
subsetting character vector into groups of numerics
I'm sure there's a simple way to do this, but I can only think of complicated ones. I have a number of character vectors that look something like this: "12 78 23 9 76 43 2 15 41 81 92 5(92 12) (81 78 5 76 9 41) (23 2 15 43)" I wish to get it into a list of numerical vectors like this: $Group [1] 12 78 23 9 76 43 2 15 41 81 92 5 $Subgroup1 [1] 92 12 $Subgroup2 [1] 81 78 5
2009 Dec 14
6
write.csv and header
Dear list, I would like to export a matrix to a TXT-File by using write.csv (not necessarily). Is there a way to add a header (with additional informations concerning the project) spanning multiple lines to this file before the actual data are listed up? Should look like this: date: filename: number of permutations: ------------ data (as a matrix) Any suggestions? Thnx in advance.
2002 Jul 29
2
How do we omit the coastline using map?
I've been able to do most things I'd like to using the map package, but I can't figure out how to fill a region without drawing a black outline. I can draw the outline in a specified colour, but as soon as I set fill to TRUE, I get a black outline in addition. My map has a lot of activity on the coastline so I don't want a black line obscuring what I do there. A pale colour to
2018 Feb 02
2
Updating Rcpp package when it is claimed by dplyr
Or, to avoid accusing you of lying. what you think is "vanilla" probably isn't. What exactly did you do? On Unix-likes, I would do something like this echo 'options(repos=list(CRAN="cran.r-project.org"));install.packages("Rcpp")' | R --vanilla (or maybe https://cloud.r-project.org is better...) -pd > On 2 Feb 2018, at 08:15 , Jeff Newmiller
2003 May 05
1
Matrix manipulation
I have a square matrix wherein a '*' indicates an HSD between the levels indicated by row name and column name. The '.' is simply marking the diagonal. A blank indicates the same group A B C D E F G H I J K L M N A . B . C * * . D * * . E * * * . F * * * .
2005 Nov 06
1
kinship package example data
I've been looking at the kinship package which looks as though it might be appropriate for my purposes. What I can't find is any reference to the data that is used in the example code. A dataframe called d10 with column names, upn, dadid, momid, sex and affect is required. One can get an idea of what sort of values should be in most columns from the description in the pedigree function,
2002 Jul 12
2
R GUI and object browser
>Date: Fri, 12 Jul 2002 08:35:26 -0700 (PDT) >From: Thomas Lumley <tlumley at u.washington.edu> >To: Patrick Connolly <p.connolly at hortresearch.co.nz> >cc: R-help <r-help at stat.math.ethz.ch> >Subject: Re: [R] R GUI and object browser >MIME-Version: 1.0 > >On Fri, 12 Jul 2002, Patrick Connolly wrote: >> >> >> I wrote my function some
2010 Mar 03
2
Rmpi on CentOS (64bit)
I got Rmpi to compile with little difficulty, but had a tricky time setting the LD_LIBRARY_PATH to use the OpenMPI libs. I now get a different error when I try to load Rmpi > require(Rmpi) Loading required package: Rmpi librdmacm: couldn't read ABI version. librdmacm: assuming: 4 libibverbs: Fatal: couldn't read uverbs ABI version. CMA: unable to open
2018 Feb 02
0
Updating Rcpp package when it is claimed by dplyr
On Fri, 02-Feb-2018 at 10:25AM +0100, peter dalgaard wrote: |> Or, to avoid accusing you of lying. what you think is "vanilla" |> probably isn't. What exactly did you do? On Unix-likes, I would do |> something like this |> echo 'options(repos=list(CRAN="cran.r-project.org"));install.packages("Rcpp")' | R --vanilla |> |> (or maybe
2002 Apr 24
2
Changing the colour in boxplots using bwplot()
I've managed to find how to change trellis.settings$box.rectangle$col and trellis.settings$box.umbrella$col but I can't figure out how to change the colour of the point used to indicate outliers. There doesn't seem to be a general colour. What am I overlooking? best -- ************************************************************* ___ Patrick Connolly {~._.~}
2018 Feb 14
2
Using gutenbergr with a firewall
I can use the gutenberg_download() function in the gutenbergr package on a computer that doeson't use a firewall, but on an almost identical installation that is behind a firewall, nothing happens, not even a time-out. Has anyone succeeded in using gutenberg_download() successfully with a firewall? I tried raising an issue at https://github.com/ropenscilabs/gutenbergr/issues/17 with no
2007 Jan 31
4
possible spam alert
The last two times I have originated message threads on R or Bioconductor I have received the message included below from someone named Patrick Connolly. Both times I was the originator of the message thread and used what I thought was a unique subject line that explained as best I could what my question was. Patrick seems to be implying that I am abusing the R and BioC help newsgroups in this