search for: cld

...d("c:\\rtest\\zotcilag.dll") /* construct a function containing; same as one in S-plus" Odata$dv <- .C("nlme_two_comp_zero_CI_lag", as.integer(length(Odata$ID)), as.double(rev(Odata$order)[1]), as.double(cbind( Odata$TIME, Odata$ITIME, Odata$CL, Odata$CLD, Odata$V1, Odata$VSS, Odata$Tlag, as.character(Odata$ID), Odata$order )), as.integer(length(Ddata$ID)), as.double(rev(Ddata$order)[1]), as.double(cbind( Ddata$TIME, Ddata$DOSE, as.character(Ddata$ID), # factor Ddata$order, as.character(Ddata$EVID) )),...

...-off to classify my probabilities into the categories. I had two questions: a) first, I am having trouble directly accessing the probabilities which may have more to do with my lack of experience with R For instance, my calls >ologit.three.NoPerFor <- lrm(Threshold.Three ~ TECI , data=CLD, na.action=na.pass) >CLD$Threshold.Predict.Three.NoPerFor<- predict(ologit.three.NoPerFor, newdata=CLD, type="fitted.ind") >CLD$Threshold.Predict.Three.NoPerFor.Cats[CLD$Threshold.Predict.Three.NoPerFor.Threshold.Three=1 > .5] <- 1 Error: unexpected '=' in &...

...)) summary(model.mc, test=adjusted(type="Westfall")) model.ci <- confint(model.mc, level= 0.95) model.ci par(mar=c(5,10,3,2)+.1) plot(model.ci,main="AJ Pairwise Differences of Logit(Proportion) OggI", xlab="Difference in logit(Proportion) Between Treatments") model.cld<-cld(model.mc) par(mar=c(3,4,6,2)+.1) plot(model.cld) The last command resulted in a blank screen. Here is my session and the class of similar objects.: version 2.13.0 (2011-04-13) Platform: i386-apple-darwin9.8.0/i386 (32-bit) locale: [1] en_US.UTF-8/en_US.UTF-8/C/C/en_US.UTF-8/en_US.UTF-...

...os/Amavisd". I have done all the configuration after that when I restart clamav So It is giving my this error message Stopping Clam AntiVirus Daemon: [FAILED] Starting Clam AntiVirus Daemon: LibClamAV Error: cl_cvdhead: Can't read CVD header in /var/clamav/daily.cld LibClamAV Error: cli_loaddbdir(): error parsing header of /var/clamav/daily.cld ERROR: Malformed database [FAILED] When I send mail to any one after that i check log so it is showing me Sep 17 16:15:20 neumann dovecot: imap-login: Logi...

...ownload all the necessary signatures again. </quote> At that point I thought all was well - until I had to reboot, when I found that it hung with a message (from memory) 'self-checking 1800'. Using Interactive boot I discovered that it came from clamd. I'm guessing that daily.cld main.cld and mirrors.dat are being sought somewhere other than /var/clamav. Maybe a symlink is required? If someone with a working clamd could advise me I'd be most grateful. For now I have had to chkconfig clamd off. Anne

...pecific bug. The answer is always the same, I tell people to remove the package Matrix, and then kml works fine. I wonder what my code is not compatible with the Matrix package. Here is a (simplified) version of the kml code : --- 8< ------------ library(longitudinalData) setClass(Class="CLD", contains=c("LongData","ListPartition")) myCld <- new("CLD", idAll=as.character(c(100,102,103,109,115,123)), idFewNA=as.character(c(100,102,103,109,115,123)), time=c(1,2,4,8,15), varNames="P", traj=matrix(c(1,2,3,1,4,...

...a nice way, # but hides the data. And checking which groups are different # isn't always easy (e.g., for NH4Cl - NH4NO3), as one # has to compare differences to a non-aligned scale (bar). onewayPlot(l) # One function that gives a results closer to what I want, # is the compact letter display (CLD) of the multcomp package. # This shows boxplots (but it is easy to overlay the actual # observations, using the points() function) and uses letters # to indicate non-significance. # # (Note that (if I have understood everything correctly) this # doesn't actually calculcate Tukey HSD values (the...

...ces() f2 <- function(pkg) !is.null(.getNamespace(pkg)) require(microbenchmark) pkg <- "foo"; (mbM <- microbenchmark(r1 <- f1(pkg), r2 <- f2(pkg))); stopifnot(identical(r1,r2)); r1 ## Unit: microseconds ## expr min lq mean median uq max neval cld ## r1 <- f1(pkg) 38.516 40.9790 42.35037 41.7245 42.4060 82.922 100 b ## r2 <- f2(pkg) 1.331 1.8285 2.13874 2.0855 2.3365 7.252 100 a ## [1] FALSE pkg <- "stats"; (mbM <- microbenchmark(r1 <- f1(pkg), r2 <- f2(pkg))); stopifnot(identical(r1,r2)); r1 ## Un...

...with 7-zip) into it's current 1.86 gig .dat format. I know that the data is "just a plain ASCII file with 720 columns and 360 rows per time step (month). It should be readable by anything!" There are 1272 steps. Here is what happens when I try to assign the file to an object: > clds<-read.table("C:\\CRU Data\\TS3.0\\Cloud\\cru_ts_3_00.1901.2006.cld.dat", header = TRUE, row.names = 1) Error in read.table("C:\\CRU Data\\TS3.0\\Cloud\\cru_ts_3_00.1901.2006.cld.dat", : duplicate 'row.names' are not allowed In addition: There wer...

...gt; Retrieving http://db.nl.clamav.net/daily-24753.cdiff > Trying to download http://db.nl.clamav.net/daily-24753.cdiff (IP: > 2400:cb00:2048:1::6810:b98a) > Downloading daily-24753.cdiff [100%] > cdiff_apply: Parsed 264 lines and executed 264 commands > Loading signatures from daily.cld > Properly loaded 2013647 signatures from new daily.cld > daily.cld updated (version: 24753, sigs: 2013647, f-level: 63, builder: neo) > Querying daily.24753.91.1.0.2400cb0020480001000000006810b98a.ping.clamav.net > bytecode.cvd version from DNS: 324 > bytecode.cld is up to date (ver...

...on(c(a, list(b)), env = parent.frame()) a <- as.pairlist(alist(x = , y = )) b <- quote(x + y) library("microbenchmark") microbenchmark(make_fn_1(a, b), make_fn_2(a, b)) # Unit: microseconds # expr min lq mean median uq max neval cld # make_fn_1(a, b) 1.671 1.8855 2.13297 2.039 2.1950 9.852 100 a # make_fn_2(a, b) 3.541 3.7230 4.13400 3.906 4.1055 23.153 100 b At first I thought the gap was due to the overhead of calling c(a, list(b)). But this turns out not to be the case: make_fn_weird <- function...

...s and executed 264 commands Retrieving http://db.nl.clamav.net/daily-24753.cdiff Trying to download http://db.nl.clamav.net/daily-24753.cdiff (IP: 2400:cb00:2048:1::6810:b98a) Downloading daily-24753.cdiff [100%] cdiff_apply: Parsed 264 lines and executed 264 commands Loading signatures from daily.cld Properly loaded 2013647 signatures from new daily.cld daily.cld updated (version: 24753, sigs: 2013647, f-level: 63, builder: neo) Querying daily.24753.91.1.0.2400cb0020480001000000006810b98a.ping.clamav.net bytecode.cvd version from DNS: 324 bytecode.cld is up to date (version: 324, sigs: 89, f-le...

Hello all, Been having an issue today that I can't seem to solve, so reaching out to others much more knowledgeable for help/advice/assistance. I ran the software update this morning and installed 134 packages, clamd was one of the packages. Upon completion of the update, I needed to reboot the box. During bootup I got the following issue: Starting Clam AntiVirus Daemon: WARNING: Ignoring

...byrow = TRUE) # Example matrix lambda <- c(2, 3, 4) # Example vector colNN <- t(NN) microbenchmark( sweep = sweep(NN, 2, lambda, "/"), transpose = t(t(NN)/lambda), colNN = colNN/lambda ) Unit: nanoseconds expr min lq mean median uq max neval cld sweep 13817 14145 15115.06 14350 14657.5 75932 100 a transpose 1845 1927 2151.68 2132 2214.0 7093 100 b colNN 82 123 141.86 123 164.0 492 100 c Note that transpose is much faster than sweep because it is doing less work, I believe essentially just chang...

...//db.nl.clamav.net/daily-24753.cdiff >> Trying to download http://db.nl.clamav.net/daily-24753.cdiff (IP: >> 2400:cb00:2048:1::6810:b98a) >> Downloading daily-24753.cdiff [100%] >> cdiff_apply: Parsed 264 lines and executed 264 commands >> Loading signatures from daily.cld >> Properly loaded 2013647 signatures from new daily.cld >> daily.cld updated (version: 24753, sigs: 2013647, f-level: 63, builder: neo) >> Querying daily.24753.91.1.0.2400cb0020480001000000006810b98a.ping.clamav.net >> bytecode.cvd version from DNS: 324 >> bytecode.cl...

...e __FD_CLR_BTR "btrl" # define __FD_ISSET_BT "btl" # endif # define __FD_ZERO(fdsp) \ do { \ int __d0, __d1; \ __asm__ __volatile__ ("cld; rep; " __FD_ZERO_STOS \ : "=c" (__d0), "=D" (__d1) \ : "a" (0), "0" (sizeof (fd_set) \ / s...

...%%dx" : \ This is odd at best; the standard assembly form of this instruction is: inl (%dx),%eax Also, we don't need the underscored forms of asm and volatile for kernel code. > + __asm__ __volatile__ ("movq %13, %%rbp;" \ > + "cld; rep outsb; " \ > + "movq %%rbp, %6" : \ cld shouldn't be necessary here, DF=0 is part of the normal ABI environment. You also don't save/restore %rbp here, but you do below? Seems very odd. It might be better do so something...

...pace(pkg)) >> >> require(microbenchmark) >> >> pkg <- "foo"; (mbM <- microbenchmark(r1 <- f1(pkg), r2 <- >> f2(pkg))); stopifnot(identical(r1,r2)); r1 ## Unit: >> microseconds ## expr min lq mean median uq max neval cld >> ## r1 <- f1(pkg) 38.516 40.9790 42.35037 41.7245 42.4060 >> 82.922 100 b ## r2 <- f2(pkg) 1.331 1.8285 2.13874 2.0855 >> 2.3365 7.252 100 a ## [1] FALSE >> >> pkg <- "stats"; (mbM <- microbenchmark(r1 <- f1(pkg), r2...

...ot;memory"); \ +}) + + +#define VMW_PORT_HB_OUT(in1, in2, port_num, magic, \ + eax, ebx, ecx, edx, si, di, bp) \ +({ \ + __asm__ __volatile__ ("movq %13, %%rbp;" \ + "cld; rep outsb; " \ + "movq %%rbp, %6" : \ + "=a"(eax), \ + "=b"(ebx), \ + "=c"(ecx), \ + "=d"(edx),...

...ot;memory"); \ +}) + + +#define VMW_PORT_HB_OUT(in1, in2, port_num, magic, \ + eax, ebx, ecx, edx, si, di, bp) \ +({ \ + __asm__ __volatile__ ("movq %13, %%rbp;" \ + "cld; rep outsb; " \ + "movq %%rbp, %6" : \ + "=a"(eax), \ + "=b"(ebx), \ + "=c"(ecx), \ + "=d"(edx),...