search for: chemotherapi

Dear R users, I d like to assess the effect of "treatment" covariate on a disease relapse risk with the package cmprsk. However, the effect of this covariate on survival is time-dependent (assessed with cox.zph): no significant effect during the first year of follow-up, then after 1 year a favorable effect is observed on survival (step function might be the correct way to say that ?).

Hello, I would like, if it is possible, to compare the effect of a variable across regression models. I have looked around but I haven't found anything. Maybe someone could help? Here is the problem: I am studying the effect of a variable (age) on an outcome (local recurrence: lr). I have built 3 models: - model 1: lr ~ age y = \beta_(a1).age - model 2: lr ~ age + presentation

Dear R users, I d like to assess the effect of "treatment" covariate on a disease relapse risk with the package cmprsk. However, the effect of this covariate on survival is time-dependent (assessed with cox.zph): no significant effect during the first year of follow-up, then after 1 year a favorable effect is observed on survival (step function might be the correct way to say that

Dear R community Recently, dear Henrique Dallazuanna literally saved me solving one problem on data transformation which follows: (n_, _n, j_, k_ signify numbers) SOURCE DATA: id cycle1 cycle2 cycle3 ? cycle_n 1 c c c c 1 m m m m 1 f f f f 2 m m m NA 2

Hello All, Recently developed the code below for graphing patterns of chemotherapy administration. As someone just starting to use R in their work, I managed to figure out some parts of the code but needed help with others. setwd("N:/Regimen Coding/0906/Plots Test") getwd() TestData <- structure(list(profile_key = c(1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 3, 3, 3, 3, 3), line = c(1, 1,

OK this is bound to be something silly as I'm completely new to R - having started using it yesterday. However I am already warming to its lack of 'proper' GUI... I like being able to rerun a command by editing one parameter easily... try and do that in a Excel Chart Wizzard! I eventually want to use it to analyse some chemotherapy response / survival data. That data will not be

Hello again, I m trying to use timereg package as you suggested (R2.7.1 on XP Pro). here is my script based on the example from timereg for a fine & gray model in which relt = time to event, rels = status 0/1/2 2=competing, 1=event of interest, 0=censored random = covariate I want to test library(timereg) rel<-read.csv("relapse2.csv", header = TRUE, sep = ",",

Hi al, I have a dataset (see attached), which basically involves 4 treatments for a chemotherapy drug. Samples were taken from 2 biopsy locations, and biopsy were taken at 2 time points. So each subject has 4 data points (from 2 biopsy locations and 2 time points). The objective is to study treatment difference.? I used lme to fit a mixed model that uses "biopsy.site nested within pid"

Hi Guys, My first post here. I have recently installed RH9 and am having some rather wierd problems that make me suspect file corruption. After some useage the machine locked up hard when trying to use 3d graphics (I have a radeon 7200 with dri enabled). After this happened occasionally the system refuses to boot- it stops at the apm line of the kernel boot process. I tried looking at my hard

Hi-- While I agree that we cannot agree on the ideal algorithms, we should be taking practical steps to implement microarrays in the clinic. I think we can all agree that our algorithms have some degree of efficacy over and above conventional diagnostic techniques. If patients are dying from lack of diagnostic accuracy, I think we have to work hard to use this technology to help them, if we

I have an error for a simple optimization problem. Is there anyone knowing about this error? lambda1=-9 lambda2=-6 L<-function(a){ s2i2f<-(exp(-lambda1*(250^a)-lambda2*(275^a-250^a)) -exp(-lambda1*(250^a)-lambda2*(300^a-250^a))) logl<-log(s2i2f) return(-logl)} optim(1,L) Error in optim(1, L) : function cannot be evaluated at initial parameters Thank you in advance -- View this

Dear all, The CRUK MI have multiple positions in and around bioinformatics, biostatistics and computational biology. These range from HPC and mathematical programming, through biostatistics and biomarkers, to computational biology and bioinformatics. Focuses include single cell genomics and personalised medicine in lung and prostate cancer. For full details, please visit our website at:

>> We are ready to spend more than 10.000 euros to help Xen to support Windows >> 2000 >I asked a Microsoft sales guy about ports of Windows and got this quote >forwarded from the Microsoft Research guys in Cambridge >"The XenoXP work is not currently under active development. Whilst >there is no *technical* reason that it can''t be done (and it would Ok

A user asked me about this and I can't figure it out. tmt% R R Under development (unstable) (2018-04-09 r74565) -- "Unsuffered Consequences" Copyright (C) 2018 The R Foundation for Statistical Computing Platform: x86_64-pc-linux-gnu (64-bit) > library(survival) > data(cgd0) Warning message: In data(cgd0) : data set ?cgd0? not found ---- The data set is present and can be

Dear List, I am (again) looking at meta-regression as a way to refine meta-analytic results. What I want to do is to assess the impact of some fixed factors on the results of a meta-analysis. Some of them may be crossed with the main factor of the meta-analysis (e. g. clinical presentation of a disease, defining subgroups in each of the studies under analysis), some of them may be a grouping

Hi Everybody, please can you help me how to call BayesX in R in order to see the graph already exist in BayesX Thanks ---------- Forwarded message ---------- From: <r-help-request@r-project.org> Date: Sat, Jan 22, 2011 at 5:00 AM Subject: R-help Digest, Vol 95, Issue 22 To: r-help@r-project.org Send R-help mailing list submissions to r-help@r-project.org To subscribe or