search for: checkvignettes

...age 'Tools': The following object(s) are masked from package:tools : .checkDemoIndex .checkVignetteIndex .installMD5sums .installPackageDescription .installPackageIndices buildVignettes checkAssignFuns checkDocArgs checkDocStyle checkFF checkMD5sums checkMethods checkTnF checkVignettes codoc md5sum pkgVignettes print.checkAssignFuns print.checkDemoIndex print.checkDocArgs print.checkDocStyle print.checkFF print.checkMethods print.checkTnF print.checkVignetteIndex print.checkVignettes print.codoc print.undoc Rdindex Rtangle RtangleSetup RtangleWritedoc RweaveLatex RweaveLatexOptio...

...ckages that dependend on survival (605 as of today) before sending a new release to CRAN. It has a few false positives which I then follow up on.? (Mostly packages with as-yet-incomplete tests in their inst directory). ?Issue: testInstalledPackage("mets")? generates an? "Error in checkVignettes(pkg, lib.loc, latex = FALSE, weave = TRUE)" message, which stops my script.? The source code for that package passes R CMD check. I can easily work around this in the short term by adding mets to my do-not-check list. Footnote: the newer "check_packages_in_dir" routine doesn't...

...following: *** Weave Errors *** Error in driver$runcode(drobj, chunk, chunkopts) : Error in eval(expr, envir, enclos) : couldn't find function "pacf.mts" *** Source Errors *** Error in eval(expr, envir, enclos) : couldn't find function "pacf.mts" make[1]: *** [checkVignettes] Error 1 I don't really understand the new namespace mechanism, so I am not sure if this is a problem with R-1.7.0beta, or because of a change I should be making in my code. Does it make sense that the generic pacf is found, but not the method pacf.mts? (I am calling pacf and not pacf.mts.)...

...bution details. R is a collaborative project with many contributors. Type `contributors()' for more information. Type `demo()' for some demos, `help()' for on-line help, or `help.start()' for a HTML browser interface to help. Type `q()' to quit R. > library(tools) > checkVignettes(dir='/home/paul/dse/src/pac/monitor', workdir = 'cur', keepfiles=TRUE) Program received signal SIGILL, Illegal instruction. 0x080786ff in file_fgetc (con=0xbfffc830) at connections.c:289 289 this->wpos = ftell(this->fp); (gdb) bt #0 0x080786ff in file_fgetc (con...

The subject line says it all. How can I find what Error: cannot set length of non-vector means? RTFS is no help. I can find out of course that it comes from "lengthgets", but who called that? Not me! The situation is as follows. I am trying to get a package ready for CRAN. Every time I run "R CMD check" I get this error when building the package vignette. But (!)

Dear R folks, One of the fantastic new tools in R is `Sweave'. I have tested it so much that I know it works and produces fine documentation, and with (GNU) Emacs/ESS it is nice to work with, too. I started to have a look at including some Swoven (is that a strong verb?) documentation with my R package, but it seems that there is no model to copy among those packages that I have installed in

I have packages where I know CRAN and other test platforms do not have all the resources to build the vignettes, for example, access to databases. Previously I think putting BuildVignettes: false in the DESCRIPTION file resolved this, by preventing CRAN checks from attempting to run the vignette code. (If it was not this, then there was some other magic I don't understand.) Now, when

...stribution details. R is a collaborative project with many contributors. Type `contributors()' for more information. Type `demo()' for some demos, `help()' for on-line help, or `help.start()' for a HTML browser interface to help. Type `q()' to quit R. > library(tools) > checkVignettes(dir='/home/paul/dse/src/pac/dse2', workdir = 'cur', keepfiles=TRUE) Program received signal SIGSEGV, Segmentation fault. 0x080784ff in file_fgetc (con=0xbfffc8a0) at connections.c:291 291 fseek(this->fp, this->rpos, SEEK_SET); (gdb) bt #0 0x080784ff in file_fgetc...

...project with many contributors. Type `contributors()' for more information. Type `demo()' for some demos, `help()' for on-line help, or `help.start()' for a HTML browser interface to help. Type `q()' to quit R. library(tools) > > library(tools) > gctorture() > checkVignettes(dir='/home/paul/dse/src/pac/monitor', workdir = 'cur', keepfiles=TRUE) Program received signal SIGSEGV, Segmentation fault. 0x080c1598 in RunGenCollect (size_needed=0) at memory.c:1210 1210 PROCESS_NODES(); (gdb) bt #0 0x080c1598 in RunGenCollect (size_needed=0) at memory....

...files in the data directory are now checked, as packages are _still_ misusing it for non-R data files. It now extracts and runs the R code for each vignette in a separate directory and R process: this is done in the package's declared encoding. Rather than call tools::checkVignettes(), it calls tool::buildVignettes() to see if the vignettes can be re-built as they would be by R CMD build. Option --use-valgrind now applies only to these runs, and not when running code to rebuild the vignettes. This version does a much better job of suppressing ou...

...files in the data directory are now checked, as packages are _still_ misusing it for non-R data files. It now extracts and runs the R code for each vignette in a separate directory and R process: this is done in the package's declared encoding. Rather than call tools::checkVignettes(), it calls tool::buildVignettes() to see if the vignettes can be re-built as they would be by R CMD build. Option --use-valgrind now applies only to these runs, and not when running code to rebuild the vignettes. This version does a much better job of suppressing ou...

...text html latex RweaveLatex text html latex Sweave text html latex example checkFF text html latex example checkTnF text html latex checkVignettes text html latex codoc text html latex tools-internal text html latex undoc text html latex example >>> Building/Updating help pages for package `ts' Forma...