search for: check_package_depend

...tained in the DESCRIPTION Depends/Suggests/Imports entries. See the information on DESCRIPTION files in the chapter 'Creating R packages' of the 'Writing R Extensions' manual. ---------------------------------------------------------------------- The error message is from tools:::.check_package_depends() function which is used by R CMD check. check_package_depends() calls .build_vignette_index() to get the vignettes dependency list For my test package, the result is: > reqs <- unique(unlist(tools:::.build_vignette_index("testpkg/inst/doc/")$Depends)) > reqs [1] "stats &q...

...Suggests entries. I got the same behaviour with recent R-devel (2007-04-18 r41219). Search on R-{help,devel} and BioC mailing lists did not show any relevant info for this error. Search in R-devel sources reveals that above error string comes from src/library/tools/R/{all.R,QC.R} - function print.check_package_depends, which in turns uses info from function .check_package_depends and it seems to me that relevant code is on lines 2436-2447. I am attaching both test and test2 tarballs so anyone can test this easily. Version: platform = i486-pc-linux-gnu arch = i486 os = linux-gnu system = i486, linux-gnu s...

...nt.codoc’, ‘print.codocClasses’, ‘print.codocData’, ‘print.subdir_tests’, ‘print.undoc’, ‘print.check_Rd_files_in_Rd_db’, ‘print.check_Rd_xrefs’, ‘print.check_T_and_F’, ‘print.check_code_usage_in_package’, ‘print.check_dotInternal’, ‘print.check_make_vars’, ‘print.check_package_code_syntax’, ‘print.check_package_depends’, ‘print.check_package_description’, ‘print.check_package_description_encoding’, ‘print.check_package_license’, ‘print.check_package_datasets’, ‘print.check_packages_used’ sont déclarées dans NAMESPACE mais sont introuvables Execution halted make[3]: *** [all] Error 1 make[3]: Leaving directory `...

Hi, I have revised my package cwhmisc and want to re-submit it (meeting a deadline soon). One big stumbling stone is the 'sudden' appearance of > sessionInfo() R version 2.15.1 (2012-06-22) Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit) locale: [1] C attached base packages: [1] tools tcltk stats4 splines parallel datasets compiler [8] graphics grDevices

Dear all, I seem to be unable to check a source package since I upgraded R to 2.3.0 (Ubuntu Linux 5.1). I get this: * checking package dependencies ... ERROR > tools:::.check_package_depends("/home/adi/Work/QCAGUI") I have even tried with R-patched, same result. My Renviron does specify the path to the installed packages (and all depending packages are installed): R_LIBS=${R_LIBS-'/home/adi/Installed/R/site-library:/usr/local/lib/R/site-library:/usr/local/lib/R/librar...

I'm testing a FC5 machine for use in a student lab. R 2.3.1 is installed and seems to work fine. There is one peculiarity - the logins are authenticating to a server, and a "verbose" flag is set somewhere, leading to lots of spurious messages like this request done: ld 0xa227598 msgid 1 which may be confusing R. However, R CMD check seems to fail for packages with no

...anvas is no longer painted on copy or save in Cocoa Quartz. o identify() in Quartz can now be terminated by either using popup menu equivalent (Ctrl-click or second mouse button) or by pressing the <Esc> key. The latter was documented but did not work. o tools:::.check_package_depends() {called from 'R CMD check'} now also works correctly when directory-name != package-name. o Source references were sometimes off by a line. o The quartz() parameter 'antialias' is no longer ignored. o The Quartz device is now trying hard to remove ant...

...anvas is no longer painted on copy or save in Cocoa Quartz. o identify() in Quartz can now be terminated by either using popup menu equivalent (Ctrl-click or second mouse button) or by pressing the <Esc> key. The latter was documented but did not work. o tools:::.check_package_depends() {called from 'R CMD check'} now also works correctly when directory-name != package-name. o Source references were sometimes off by a line. o The quartz() parameter 'antialias' is no longer ignored. o The Quartz device is now trying hard to remove ant...