Displaying 8 results from an estimated 8 matches for "check_package_depends".
2007 Jul 18
1
possible bug R CMD check: No space(s) allowed after \VignetteDepends{}
...tained in
the DESCRIPTION Depends/Suggests/Imports entries.
See the information on DESCRIPTION files in the chapter 'Creating R
packages' of the 'Writing R Extensions' manual.
----------------------------------------------------------------------
The error message is from tools:::.check_package_depends() function
which is used by R CMD check.
check_package_depends() calls .build_vignette_index() to get the vignettes
dependency list
For my test package, the result is:
> reqs <-
unique(unlist(tools:::.build_vignette_index("testpkg/inst/doc/")$Depends))
> reqs
[1] "stats &qu...
2007 Apr 18
1
Problem with: Vignette dependencies (\VignetteDepends{} entries) must be contained in
...Suggests entries.
I got the same behaviour with recent R-devel (2007-04-18 r41219). Search
on R-{help,devel} and BioC mailing lists did not show any relevant info
for this error.
Search in R-devel sources reveals that above error string comes from
src/library/tools/R/{all.R,QC.R} - function print.check_package_depends,
which in turns uses info from function .check_package_depends and it
seems to me that relevant code is on lines 2436-2447.
I am attaching both test and test2 tarballs so anyone can test this easily.
Version:
platform = i486-pc-linux-gnu
arch = i486
os = linux-gnu
system = i486, linux-gnu
st...
2009 Aug 20
1
Problem with updating/reinstalling R under UBUNTU (Hardy)
...nt.codoc’, ‘print.codocClasses’, ‘print.codocData’, ‘print.subdir_tests’, ‘print.undoc’, ‘print.check_Rd_files_in_Rd_db’, ‘print.check_Rd_xrefs’, ‘print.check_T_and_F’, ‘print.check_code_usage_in_package’, ‘print.check_dotInternal’, ‘print.check_make_vars’, ‘print.check_package_code_syntax’, ‘print.check_package_depends’, ‘print.check_package_description’, ‘print.check_package_description_encoding’, ‘print.check_package_license’, ‘print.check_package_datasets’, ‘print.check_packages_used’ sont déclarées dans NAMESPACE mais sont introuvables
Execution halted
make[3]: *** [all] Error 1
make[3]: Leaving directory `/...
2012 Aug 28
1
Package cwhmisc and problems
Hi,
I have revised my package cwhmisc and want to re-submit it (meeting a
deadline soon). One big stumbling stone is the 'sudden' appearance of
> sessionInfo()
R version 2.15.1 (2012-06-22)
Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
locale:
[1] C
attached base packages:
[1] tools tcltk stats4 splines parallel datasets compiler
[8] graphics grDevices
2006 May 17
2
checking package dependencies
Dear all,
I seem to be unable to check a source package since I upgraded R to 2.3.0
(Ubuntu Linux 5.1). I get this:
* checking package dependencies ... ERROR
> tools:::.check_package_depends("/home/adi/Work/QCAGUI")
I have even tried with R-patched, same result.
My Renviron does specify the path to the installed packages (and all depending
packages are installed):
R_LIBS=${R_LIBS-'/home/adi/Installed/R/site-library:/usr/local/lib/R/site-library:/usr/local/lib/R/library...
2006 Sep 19
1
R CMD check fails at package dependencies check on Fedora Core 5, works on other systems
I'm testing a FC5 machine for use in a student lab. R 2.3.1 is installed and
seems to work fine. There is one peculiarity - the logins are authenticating
to a server, and a "verbose" flag is set somewhere, leading to lots of
spurious messages like this
request done: ld 0xa227598 msgid 1
which may be confusing R.
However, R CMD check seems to fail for packages with no
2008 Jun 23
0
R 2.7.1 is released
...anvas is no longer painted on copy or save in Cocoa Quartz.
o identify() in Quartz can now be terminated by either using popup
menu equivalent (Ctrl-click or second mouse button) or by pressing
the <Esc> key. The latter was documented but did not work.
o tools:::.check_package_depends() {called from 'R CMD check'} now
also works correctly when directory-name != package-name.
o Source references were sometimes off by a line.
o The quartz() parameter 'antialias' is no longer ignored.
o The Quartz device is now trying hard to remove anti...
2008 Jun 23
0
R 2.7.1 is released
...anvas is no longer painted on copy or save in Cocoa Quartz.
o identify() in Quartz can now be terminated by either using popup
menu equivalent (Ctrl-click or second mouse button) or by pressing
the <Esc> key. The latter was documented but did not work.
o tools:::.check_package_depends() {called from 'R CMD check'} now
also works correctly when directory-name != package-name.
o Source references were sometimes off by a line.
o The quartz() parameter 'antialias' is no longer ignored.
o The Quartz device is now trying hard to remove anti...