Displaying 2 results from an estimated 2 matches for "cd44_wiz".
2008 Jan 24
3
store variable as tab-del. txt-file
...e with the following commands:
> fit12<-lmFit(qrg[,1:2])
> t12<-toptable(fit12,adjust="fdr",number=25,genelist=qrg$genes[,1])
> t12
ID logFC t P.Value adj.P.Val B
522 PLAU_OP -6.836144 -8.420414 5.589416e-05 0.01212520 2.054965
1555 CD44_WIZ -6.569622 -8.227938 6.510169e-05 0.01212520 1.944046
767 CD44_WIZ -8.164317 -8.201678 6.648556e-05 0.01212520 1.928622
1234 EMP1_WIZ -6.822609 -8.145985 6.953146e-05 0.01212520 1.895674
445 EMP1_WIZ -6.796011 -8.079979 7.334676e-05 0.01212520 1.856207
1310 PLAU_OP -6.361645 -7.955721 8.11860...
2008 Feb 11
3
Difference between P.Value and adj.P.Value
Hallo,
> fit12<-lmFit(qrg[,1:2])
> t12<-toptable(fit12,adjust="fdr",number=25,genelist=qrg$genes[,1])
> t12
ID logFC t P.Value adj.P.Val B
522 PLAU_OP -6.836144 -8.420414 5.589416e-05 0.01212520 2.054965
1555 CD44_WIZ -6.569622 -8.227938 6.510169e-05 0.01212520 1.944046
Can anyone tell me what the difference is between P.Value and
adj.P.Value? I need to analyse microarrays and should say if there exist
differential expressed genes. Which P.Value should I use?
Thanks, Corinna