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casttest
2011 Jan 06
1
Hmisc, summary.formula and catTest
...em as NA and "" without success-throws either a blank or an error msg trying to round a non-numeric value respectively.
reproducible example:
ex<-pbc
summary(trt~sex+ascites,data=ex,test=T,method="reverse")
summary(trt~sex+ascites,data=ex,test=T,method="reverse",catTest=u)
The closest I get is
u<-function(a,b){
j<-fisher.test(a)
p<-list(P=j$p.value,stat=1,df=1,testname=j$method,statname="")
return(p)
}
However then I manually have to edit the output. Is there a smart way of doing this?
//M