Displaying 5 results from an estimated 5 matches for "bumphunt".
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bumphunter
2013 Mar 13
1
Failed to locate 'weave' output file / vignette product does not have a known filename extension
...[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
I also get another error on windows only ( it builds successfully on
Mac and Linux) when trying to build bumphunter
http://bioconductor.org/packages/2.12/bioc/html/bumphunter.html
Warning: running command
'"C:\PROGRA?2\MIKTEX?1.9\miktex\bin\texi2dvi.exe" --quiet --pdf
"bumphunter.tex" -I
"E:/biocbld/bbs-2.12-bioc/R/share/texmf/tex/latex" -I
"E:/biocbld/bbs-2.12-bioc/R/s...
2017 Dec 29
2
Facing problem in installing the package named "methyAnalysis"
...e RStudio software.
After that when I have tried to install the package named "methyAnalysis".
It shows some error given below.
No methods found in package ?IRanges? for requests: ?%in%?,
?elementLengths?, ?elementMetadata?, ?ifelse?, ?queryHits?, ?Rle?,
?subjectHits?, ?t? when loading ?bumphunter?
Error: package or namespace load failed for ?methyAnalysis?:
objects ?.__T__split:base?, ?split? are not exported by 'namespace:IRanges'
In addition: Warning message:
replacing previous import ?BiocGenerics::image? by ?graphics::image? when
loading ?methylumi?
I also try to install the...
2017 Dec 29
2
Facing problem in installing the package named "methyAnalysis"
...tried to install the package named "methyAnalysis".
>> It shows some error given below.
>>
>> No methods found in package ?IRanges? for requests: ?%in%?,
>> ?elementLengths?, ?elementMetadata?, ?ifelse?, ?queryHits?, ?Rle?,
>> ?subjectHits?, ?t? when loading ?bumphunter?
>> Error: package or namespace load failed for ?methyAnalysis?:
>> objects ?.__T__split:base?, ?split? are not exported by
>> 'namespace:IRanges'
>> In addition: Warning message:
>> replacing previous import ?BiocGenerics::image? by ?graphics::image? when...
2013 Oct 24
1
advise on Depends
This is about the new note
Depends: includes the non-default packages:
‘BiocGenerics’ ‘Biobase’ ‘lattice’ ‘reshape’ ‘GenomicRanges’
‘Biostrings’ ‘bumphunter’
Adding so many packages to the search path is excessive and importing
selectively is preferable.
Let us say my package A either uses a class B (by producing an object that
has B embedded as a slot) from another package or provides a specific
method for a generic defined in another package (both...
2017 Dec 29
0
Facing problem in installing the package named "methyAnalysis"
...r that when I have tried to install the package named "methyAnalysis".
> It shows some error given below.
>
> No methods found in package ?IRanges? for requests: ?%in%?,
> ?elementLengths?, ?elementMetadata?, ?ifelse?, ?queryHits?, ?Rle?,
> ?subjectHits?, ?t? when loading ?bumphunter?
> Error: package or namespace load failed for ?methyAnalysis?:
> objects ?.__T__split:base?, ?split? are not exported by 'namespace:IRanges'
> In addition: Warning message:
> replacing previous import ?BiocGenerics::image? by ?graphics::image? when
> loading ?methylumi?...