Displaying 11 results from an estimated 11 matches for "biomedicum".
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biomedical
2024 Jul 11
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
...t I may need it in the future for other projects.
Br,
Lauren
--
Lauren J. Gerber
Bioinformatician
Precision Systems Medicine (Kallioniemi) Research Group
iCAN ? Digital Precision Cancer Medicine Flagship
Institute for Molecular Medicine Finland (FIMM)
Nordic EMBL Partnership for Molecular Medicine
Biomedicum Helsinki 2U, D301a1
P.O. Box 20 (Tukholmankatu 8)
FI-00014 University of Helsinki, Finland
lauren.gerber at helsinki.fi
From: marcoblanchette at icloud.com <marcoblanchette at icloud.com>
Date: Wednesday, 10. July 2024 at 23.17
To: Gerber, Lauren J <lauren.gerber at helsinki.fi>, Dirk...
2024 Jul 11
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
...t I may need it in the future for other projects.
Br,
Lauren
--
Lauren J. Gerber
Bioinformatician
Precision Systems Medicine (Kallioniemi) Research Group
iCAN ? Digital Precision Cancer Medicine Flagship
Institute for Molecular Medicine Finland (FIMM)
Nordic EMBL Partnership for Molecular Medicine
Biomedicum Helsinki 2U, D301a1
P.O. Box 20 (Tukholmankatu 8)
FI-00014 University of Helsinki, Finland
lauren.gerber at helsinki.fi
From: marcoblanchette at icloud.com <marcoblanchette at icloud.com>
Date: Wednesday, 10. July 2024 at 23.17
To: Gerber, Lauren J <lauren.gerber at helsinki.fi>, Dirk...
2024 Jul 10
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
...pkg/status
This is great. Thank you all so much.
Br,
Lauren
--
Lauren J. Gerber
Bioinformatician
Precision Systems Medicine (Kallioniemi) Research Group
iCAN ? Digital Precision Cancer Medicine Flagship
Institute for Molecular Medicine Finland (FIMM)
Nordic EMBL Partnership for Molecular Medicine
Biomedicum Helsinki 2U, D301a1
P.O. Box 20 (Tukholmankatu 8)
FI-00014 University of Helsinki, Finland
lauren.gerber at helsinki.fi
From: Dirk Eddelbuettel <edd at debian.org>
Date: Wednesday, 10. July 2024 at 19.09
To: Gerber, Lauren J <lauren.gerber at helsinki.fi>
Cc: Dirk Eddelbuettel <edd...
2024 Oct 15
2
R Package: 'ggbreak' in Dockerfile
...ease advise?
Thank you in advance for your help.
Br,
Lauren
--
Lauren J. Gerber
Bioinformatician
Precision Systems Medicine (Kallioniemi) Research Group iCAN Digital Precision Cancer Medicine Flagship Institute for Molecular Medicine Finland (FIMM) Nordic EMBL Partnership for Molecular Medicine Biomedicum Helsinki 2U, D301a1 P.O. Box 20 (Tukholmankatu 8)
FI-00014 University of Helsinki, Finland lauren.gerber at helsinki.fi
[[alternative HTML version deleted]]
2024 Oct 15
2
R Package: 'ggbreak' in Dockerfile
...ease advise?
Thank you in advance for your help.
Br,
Lauren
--
Lauren J. Gerber
Bioinformatician
Precision Systems Medicine (Kallioniemi) Research Group
iCAN ? Digital Precision Cancer Medicine Flagship
Institute for Molecular Medicine Finland (FIMM)
Nordic EMBL Partnership for Molecular Medicine
Biomedicum Helsinki 2U, D301a1
P.O. Box 20 (Tukholmankatu 8)
FI-00014 University of Helsinki, Finland
lauren.gerber at helsinki.fi
[[alternative HTML version deleted]]
2024 Oct 15
1
R Package: 'ggbreak' in Dockerfile
...let me know if you have any additional thoughts.
Br,
Lauren
--
Lauren J. Gerber
Bioinformatician
Precision Systems Medicine (Kallioniemi) Research Group
iCAN ? Digital Precision Cancer Medicine Flagship
Institute for Molecular Medicine Finland (FIMM)
Nordic EMBL Partnership for Molecular Medicine
Biomedicum Helsinki 2U, D301a1
P.O. Box 20 (Tukholmankatu 8)
FI-00014 University of Helsinki, Finland
lauren.gerber at helsinki.fi
From: James W. MacDonald <jmacdon at uw.edu>
Date: Tuesday, 15. October 2024 at 16.22
To: Gerber, Lauren J <lauren.gerber at helsinki.fi>, r-sig-debian at r-project.o...
2024 Oct 15
1
R Package: 'ggbreak' in Dockerfile
Lauren,
On 15 October 2024 at 13:51, Gerber, Lauren J wrote:
| I just tried fixing my script and added library(BiocManager) before library
| (ggbreak), then rebuilt the image, and am still getting the same error.
You need _two_ distinct commands. First
install.packages("BiocManager")
and second once that is done use it to install 'ggbreak' from BioConductor
2024 Jul 10
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
...pkg/status
This is great. Thank you all so much.
Br,
Lauren
--
Lauren J. Gerber
Bioinformatician
Precision Systems Medicine (Kallioniemi) Research Group
iCAN ? Digital Precision Cancer Medicine Flagship
Institute for Molecular Medicine Finland (FIMM)
Nordic EMBL Partnership for Molecular Medicine
Biomedicum Helsinki 2U, D301a1
P.O. Box 20 (Tukholmankatu 8)
FI-00014 University of Helsinki, Finland
lauren.gerber at helsinki.fi
From: Dirk Eddelbuettel <edd at debian.org>
Date: Wednesday, 10. July 2024 at 19.09
To: Gerber, Lauren J <lauren.gerber at helsinki.fi>
Cc: Dirk Eddelbuettel <edd...
2024 Jul 09
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
...rcle back here.
Thank you so much for your help.
Br,
Lauren
--
Lauren J. Gerber
Bioinformatician
Precision Systems Medicine (Kallioniemi) Research Group
iCAN ? Digital Precision Cancer Medicine Flagship
Institute for Molecular Medicine Finland (FIMM)
Nordic EMBL Partnership for Molecular Medicine
Biomedicum Helsinki 2U, D301a1
P.O. Box 20 (Tukholmankatu 8)
FI-00014 University of Helsinki, Finland
lauren.gerber at helsinki.fi
From: Dirk Eddelbuettel <edd at debian.org>
Date: Tuesday, 9. July 2024 at 9.13
To: marcoblanchette at icloud.com <marcoblanchette at icloud.com>
Cc: Dirk Eddelbuette...
2010 Mar 05
1
Error in inherits(x, "data.frame") : subscript out of bounds
...es[,i],expressions.m[j,],use="na.or.complete")
corrs[j]<-cbind(expressions[j,1:5], SNP.expr.cor)
}
all.corrs[i]<-list(cbind(map[i,1:6], corrs))
}
BR
Katja
--
Katja L?ytynoja, FM
Haartman Institute
Department of Medical Genetics
Biomedicum Helsinki
P.O.Box 63
FIN-00014 University of Helsinki
tel +358-9-19125496
gsm +358-50-4000324
fax +358-9-19125624
e-mail katja.loytynoja at helsinki.fi
2024 Jul 10
1
Issues with Ubuntu 22.04 and Installing the Latest Version of R (R 4.4.1) to Docker Image
Lauren,
I am now back home where looking into these things is a little easier. From
your first email to me, I started off with the selenium container you
mentioned as your starting point.
And that basically is your issue. It is a 'high-level' container, and it sets
a user. (Essentially) all other Dockerfiles you have seen and been pointed at
are 'lower-level' and operate as root