search for: biomedical

Dear all, Our institute has an open position for a Ph.D. student on modeling gene network in stem cells. here is the official announcement: --- The Institute for Biomedical Engineering, Department of Cell Biology, RWTH Aachen University Medical School and Helmholtz Institute for Biomedical Engineering, RWTH Aachen University invites applications of highly motivated individuals for a PhD Student Position (Bioinformatics) We invite applications of highly motivat...

...the data-frame with Name == T44. X <- dataframe[dataframe$Name=='T44'] does not work. Any ideas on how to do this? I'm sure I'm missing a simple concept here. Thanks, Anjan -- ============================= anjan purkayastha, phd bioinformatics analyst whitehead institute for biomedical research nine cambridge center cambridge, ma 02142 purkayas [at] wi [dot] mit [dot] edu 703.740.6939 [[alternative HTML version deleted]]

...cluster, several servers, workstations, 96 Tb raw disk storage and backup facilities, to provide support to bioinformatics researchers at the Institute of Predictive and Personalized Medicine of Cancer (IMPPC). The IMPPC (http://www.imppc.org) is a non-profit research center located at the Can Ruti Biomedical Campus, Badalona, near Barcelona, Spain, with young and dynamic staff. Bioinformatics and in particular Genomics is an area of research shared between nearly all current IMPPC research groups that use the computer cluster on a regular basis. Besides fulfilling the system administrator duties listed...

...by interpolation between the 7th and 8th data points). Reportedly, the second formula is not too accurate. However in my case the first formula does not make much sense. Any advice? TIA, Anjan -- ============================= anjan purkayastha, phd bioinformatics analyst whitehead institute for biomedical research nine cambridge center cambridge, ma 02142 purkayas [at] wi [dot] mit [dot] edu 703.740.6939 [[alternative HTML version deleted]]

...13 4 56 98 . . . I would like to plot for the mean and standard error of mean of repeat 1 and repeat2 for each row. Any pointers on how to do this in R? TIA, Anjan -- ============================= anjan purkayastha, phd bioinformatics analyst whitehead institute for biomedical research nine cambridge center cambridge, ma 02142 purkayas [at] wi [dot] mit [dot] edu 703.740.6939 [[alternative HTML version deleted]]

Hello, I have a question concerning courses in R in *Vienna, Austria*. Does anyone know where courses in R are offered, that you can do after having attended a course for the basics? Thanks in advance for your help. Marion [[alternative HTML version deleted]]

...a site to discuss issues related to the language, are there any forums that discuss statistical issues? I am specifically interested in the statistical issues in experimental design. TIA, Anjan -- ============================= anjan purkayastha, phd bioinformatics analyst whitehead institute for biomedical research nine cambridge center cambridge, ma 02142 purkayas [at] wi [dot] mit [dot] edu 703.740.6939 [[alternative HTML version deleted]]

...umns and then prints an error message:[ reached getOption("max.print") -- omitted 27821 rows ]]. is it possible to set the maxprint parameter so that R prints all the rows? tia, anjan -- ============================= anjan purkayastha, phd bioinformatics analyst whitehead institute for biomedical research nine cambridge center cambridge, ma 02142 purkayas [at] wi [dot] mit [dot] edu 703.740.6939 [[alternative HTML version deleted]]

...;. Would anyone like to share their experience with this Perl-R bridge? I'd like to install it in a Mac OS X. Suggestions on alternate solutions will be appreciated. Thanks in advance, Anjan -- ============================= anjan purkayastha, phd bioinformatics analyst whitehead institute for biomedical research nine cambridge center cambridge, ma 02142 purkayas [at] wi [dot] mit [dot] edu 703.740.6939 [[alternative HTML version deleted]]

Dear R-help, I am interested in using structural equation modeling. Just getting started with it, but I'm looking for suggestions for packages. As an aside, what's the best way for looking for packages at CRAN? -- Robert Terwilliger Biomedical Physicist Laboratory of Neurocognitive Development Western Psychiatric Institute and Clinic University of Pittsburgh Medical Center Loeffler Building 121 Meyran Avenue #114 Pittsburgh, PA 15213 412.383.8174 - Office 412.383.8179 - Fax em: raterwil at gmail.com http://www.wpic.pitt.edu/research/ln...

...it was still returning the same error message "duplicate 'row.names' are not allowed" to me. I have tried using "row.names=NULL", but it returned the column names as well. Does anyone know what the problem was? Thanks Fan Fan Yang Industrial Microbiology 2209 Biomedical Phys Sci Michigan State University Phone: (517)355-6463 Ext 1588 Email: yangfan1@msu.edu [[alternative HTML version deleted]]

Yesterday I just noticed the new document on R and regulatory aspects for biomedical research posted at http://www.r-project.org/doc/R-FDA.pdf Coming from an institution that performs a large number of clinical trials for FDA and being an advocate of R myself, I have found that the following issues usually come up when discussing the use of R for FDA trials: 1. Most FDA submissio...

Dear Rich, It depends how the data is generated. Although I am not an expert in ecology, I can explain it based on a biomedical example. Certain variables are generated geometrically (exponentially), e.g. MIC or Titer. MIC = Minimum Inhibitory Concentration for bacterial resistance Titer = dilution which still has an effect, e.g. serially diluting blood samples; Obviously, diluting the samples will generate the following...

...here anybody here know how to extract the -0.0664 from the result? Many thanks. -- Chen, Chao Psychiatry University of Chicago 924 E 57th St, Chicago, IL 60637 U. S. A. MOE Key Laboratory of Contemporary Anthropology and Center for Evolutionary Biology, School of Life Sciences and Institutes of Biomedical Sciences, Fudan University 220# Handan Road, Shanghai (200433) P.R.China [[alternative HTML version deleted]]

...mod3, a = list(status = levels(dat$status), infstat="control", exptime=8230), b = list(status = levels(dat$status), infstat="infected",exptime=8230)) any help gratefully received, Jo Dr Joanne Lello Cardiff University School of Biosciences Organism and Environment Group Biomedical Sciences Building Museum Avenue Cardiff CF10 3AX Tel: 02920 875885 E-mail: lelloj@cardiff.ac.uk [[alternative HTML version deleted]]

...itive Comparison of Neuronal Structure and Construction of Neuron Family Databases}, Volume = {91}, Year = {2016}} [3] https://rdrr.io/github/ropensci/RefManageR/man/toBiblatex.html -- Gregory Jefferis Division of Neurobiology MRC Laboratory of Molecular Biology Francis Crick Avenue Cambridge Biomedical Campus Cambridge, CB2 OQH, UK http://www2.mrc-lmb.cam.ac.uk/group-leaders/h-to-m/g-jefferis http://jefferislab.org http://www.zoo.cam.ac.uk/departments/connectomics

I notice for some reason you can no longer get pre- builds from the listed place. Can you point me to a better location? UEFI boot isn't working on my hardware so I'd like to try something newer. It is an IBM x3850 X6 if that's interesting info. ____ *Note: UMDNJ is now Rutgers-Biomedical and Health Sciences* || \UTGERS |---------------------*O*--------------------- ||_// Biomedical | Ryan Novosielski - Senior Technologist || \ and Health | novosirj at rutgers.edu<mailto:novosirj at rutgers.edu>- 973/972.0922 (2x0922) || \ Sciences | OIRT/High Perf & Res Comp - MSB...

...no, ....??? Adding stars to output is, to me, simply a gateway drug to this pernicous addiction.?? We shouldn't encourage it. Wrt Abe's rant about the Nature article:? I've read the article and found it to be well reasoned, and I can't say the same about the rant.?? The issue in biomedical science is that the p-value has fallen victim to Goodhart's law: "When a measure becomes a target, it ceases to be a good measure."? The article argues, and I would agree, that the .05 yes/no decision rule is currently doing more harm than good in biomedical research.?? What to do...

Opening for a Data Programmer Metrum Research Group is seeking a full-time data programmer to support our biomedical modeling and simulation services. This is an excellent opportunity to develop as a data programmer while gaining exposure to cutting edge problems in the growing field of pharmacometrics. The individual will work as an integral member of our team, based in Tariffville, CT. We provide a full benefit...

Opening for a Data Programmer Metrum Research Group is seeking a full-time data programmer to support our biomedical modeling and simulation services. This is an excellent opportunity to develop as a data programmer while gaining exposure to cutting edge problems in the growing field of pharmacometrics. The individual will work as an integral member of our team, based in Tariffville, CT. We provide a full benefit...